Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_973 |
Symbol | ribD |
ID | 8657905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 903830 |
End bp | 904927 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | riboflavin biosynthesis protein, 5-amino-6-(5-phosphoribosylamino)uracil reductase, diaminohydroxyphosphoribosylaminopyrimidine deaminase |
Protein accession | YP_003330419 |
Protein GI | 270308361 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATACA TGTCTCAAGC TTTATCACTT GCCAAGCTGG CCATTGGTCA GGTTAGCCCC AATCCGTCGG TGGGGGCTGT TATTGTTAAA AACGGCGAAG TGGTCGGTCA GGGTTTCACT CAGCCGCCAG GCGGTGACCA TGCTGAGATA GTGGCCTTGA AACAGGCTGC CGAAAAAGCC AAAGGAGCTG CTTTATATGT GACTTTGGAG CCATGTTGCC ATCAGGGGCG AACCCCGCCA TGCACCGGCT CTATTATAGA ATCAGGTATA AAAGAAGTTT ATATTGCTAC GCTGGATGAT AATCCTTTGG TTTCCGGAAA AGGTAAAAAA GAGCTGGAAA ATGCCGGTAT CAAGGTGCAT CTGGGTATGA TGGAACGTGA AGCCCGCCAG ATGAATGAAG CATATTTCAA GCATATTACC ACTGGCATGC CCTTTGTTAC TGCCAAATAT GCCATGAGCC TTGACGGCAA GACAGGTACG CGCACCGGTG ATTCCAAATG GATTTCCAAC GAAGAATCCC GTCATTTTGC TCATTATATC CGCCATATAT CTGATGTGAT TATGGCCGGG CTTAATACCA TACTCAAAGA TGATCCCCAT CTGACAGCTA GAGTAAACTG CGGGCGGGGT GGTACTTCAC ACAGTCAGCC TACCAGGGTA ATTATTGACG ATAACGGCCG GGCGCCTTTG AGTTCAAACG TTTTTCATGT TCCCGGCAAT ACCATTGTAG CTGTAGCCAA GGGGCTTACC CTTGAGGAAA AACAGGCGTA TGATGAAGTT GGGGCGAAAG TGGTGGAGCT GCCTGATGAA CGGGGGCTGG TAGATTTAAA AGCCCTGCTG CGTTATCTGG GGCAAAATGG GGTAACCAGT GTGCTGGTGG AAGGCGGCGG CATTGTGCTG GGTTCGCTTT TTGACCTGAA ACTGGTAGAC AAGGTTTTGG TATTTGTCGC TCCTATCATA ATAGGCGGCA AGGATGCCAA GATTCCGGTT GCGGGTTTGG GAGCAGAGCT AATTACAGAT TCGGCCAAAC TTCGGGATAT TACCACCACT GCCTTTGGAC AGGACGTTTT GATTTCCGGT TACGTTATTA AGGAGTAA
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Protein sequence | MKYMSQALSL AKLAIGQVSP NPSVGAVIVK NGEVVGQGFT QPPGGDHAEI VALKQAAEKA KGAALYVTLE PCCHQGRTPP CTGSIIESGI KEVYIATLDD NPLVSGKGKK ELENAGIKVH LGMMEREARQ MNEAYFKHIT TGMPFVTAKY AMSLDGKTGT RTGDSKWISN EESRHFAHYI RHISDVIMAG LNTILKDDPH LTARVNCGRG GTSHSQPTRV IIDDNGRAPL SSNVFHVPGN TIVAVAKGLT LEEKQAYDEV GAKVVELPDE RGLVDLKALL RYLGQNGVTS VLVEGGGIVL GSLFDLKLVD KVLVFVAPII IGGKDAKIPV AGLGAELITD SAKLRDITTT AFGQDVLISG YVIKE
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