Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_961 |
Symbol | |
ID | 8657893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 894941 |
End bp | 895762 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003330408 |
Protein GI | 270308350 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0043963 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTATC TGAAGAATAT TAAAATATAC CTGACTACCT ACCGCTGGAT ATGGGTGCTG ATAGGCGGGT TAGGTTTGTT TTTAGGTGCC GAGCAGCTTA TCAAACTGAC CCGCGGGACT AATTTTTTGC CGCTGTTGGT AGTTTTGGGC GCTTTCATTA TGCCGGTAAC TTTCGTGGTT TTTATATATG AACGCCTGCC GCTGGCAAAT ATAAATATCC GCTGGGTGCT GGCCAGTTTC TTTGTGGGCG GAATAATCGG GCTTTTGATG GCCGGCATGC TGGAATATGC CACTGTTTCC AGTCTGAGTC CGTCCGGACT GCTGACAGTG GGGGTTATAG AGGAAGCAGC CAAACTAATA TTTCCGATGA TGCTTTTCTG GGGCGGAGGT TTCAGGGCTG AGGCTAACGG GGTTTTGTTT GGAGTGGCGG CCGGTATGGG TTTTGCAGCT TTGGAAACTA TGGGTTATGG GGTAGTCAGC CTTATCCAGA GTCAGGGGGA TATAAACCTT CTGGAGCAGG TGCTTCTTTT CAGGGGGTTA TTATCTCCTG CCGGGCATGC CGCCTGGACG GGTATAGTCT GTGCTGTTTT GTGGAGGCAA CGAGTTGAAT ATAACAGAGG GCCTCTAAAT CTGGCGGTTA TTGGCGCATT TATACTGGCA GTGGGTCTCC ATATTGTATG GGATATAGCC AGCGGGTTGA ATCTACCCGT TGTCTGGGCG GCAATAGTGC TGCTGGCGGT GGCTGTTTTA AGTCTGCTTC TACTTATAAG GGCTATACGT CATGCCCGTT ACCAACTGCG GCGGAAAGAT TTATTATTTT AG
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Protein sequence | MNYLKNIKIY LTTYRWIWVL IGGLGLFLGA EQLIKLTRGT NFLPLLVVLG AFIMPVTFVV FIYERLPLAN INIRWVLASF FVGGIIGLLM AGMLEYATVS SLSPSGLLTV GVIEEAAKLI FPMMLFWGGG FRAEANGVLF GVAAGMGFAA LETMGYGVVS LIQSQGDINL LEQVLLFRGL LSPAGHAAWT GIVCAVLWRQ RVEYNRGPLN LAVIGAFILA VGLHIVWDIA SGLNLPVVWA AIVLLAVAVL SLLLLIRAIR HARYQLRRKD LLF
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