| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_932 |
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| Symbol | |
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| ID | 8657864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. VS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013552 |
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| Strand | - |
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| Start bp | 863746 |
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| End bp | 865422 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | |
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| Product | ABC-type oligopeptide transport system, periplasmic component |
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| Protein accession | YP_003330379 |
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| Protein GI | 270308321 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000268358 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGGGA AGTTACTATA CCTGCTGGCA ACCCTGTTAA TCATTGTGCC AATTGTCTTT
AGCGGTTGCA CCAGTGATGA CAACAATGAT GACGGGGATA ACGGAACTGT TACCACTCCT
CAGGTGTTCC GTGTTAACCT GGCAGGTGAA CCCAACACCA TAGATCCCAA CAAGGCTTCT
TGGGCTACGG AAAGATCCGT AATCATGCTG CTCTTTGTGG GTCTGCTGGA CTTCAATTCA
GACTTGTCCT TAAAAGCAGC ATGTGCTCAG GAAATTCCGA CCGTGGCAAA CGGGGGTATT
TCGGCAGACG GCTTGACCTA TACCTTCAAA GTCAAATCAA ATGTGACCTG GAGTGATGGC
TCAAAGGTTA CCGCCCATGA CTTTGAATAT AGCATCAAAC GTATGCTTGA CCCCGACACA
GCTGCTGAAT ATGCCACTTT CTACTATGAT ATTGTGGGTG CAGCTGAGTT CAACGGCGCA
GCGGATGCTG ATGCCTCCAC CAAGACAGCC CTGCGGAATG CCGTAGGTGT AACAGCGGTA
GATGATACTA CCCTGCGCAT TACCTTAGCC CAAACCCGTC CTACTTTCCT CTCCATTATG
GCTCTCTGGC CTACTTCTCC GGTTAAGGAA AGTGTTATTA CTGCTAAGGG TACTGCTTGG
ACAGAAGCCG GTAACCTTAT CGGCAACGGG CCTTATACCC TGAAAGAATG GGTGCATCAG
GATCACATGA CATTTACCAT CAACCAGAAT TACTGGGATA CCAAACCTAC CCTGACTGAA
ATCAAATACT TTATGATTAC TGATGCTACT CAGGAGTATT CGGCTTATCA GAACGGTGAG
CTTGATATGG CTAGAGTTCC GGTAGGGACG GAAACCGCTG TATTGGCCGA CTCGGTTTAC
GGCAAGCATG TGGTACGGAA TAATGACCTG ACCACCTTTG CTTTCCAGTT TAATGTTAAT
AAAGCCCCCT TTGATAATCT GCTGGTAAGG CAGGCTATGT CCTGCGCCAT TGACAGGGTA
GCTTTTGTGG ACCAAGTCAG AGGTGGCGTA GGTGCACCTG CTTATTCGTG GATTCCGCCA
GGCATGCCCG GATACGATGC TGATTTGGGT AAAGATTTTG CATTTAACGT TACCAAAGCC
AAACAGCTTC TGGCTGATGC CGGCTATCCC AACGGAGTTG GCTTACCCGA ACTTAAATTC
CAGTATGCAG ATACTGCCAG CAACCGCACT ATCGCTCAGT TCCTGCAGGC TCAGCTAAAG
ACCAATTTAA ATATTGATCT TACTCTTGAA CCCATGGAAC CTTCAGCTTT CAGTGCCTTT
GTAAACAGCG AACAGCATAC TTGGGCATGG TTTGGCTGGG GAGCTGATTA CCCAGATCCC
GATAACTGGC TGCCTGATTT GTTCGGCACT GGCGGCGGCA ATAACCATAC AGGTTATTCC
AATCCTGCCT TTGACGCCTT GGCAAGACAG GCCATGATGG AACTTGATAA TACCCTGCGT
CTTCAGATGT GGGCTCAAGC CCAGGAAATG GTTATGAACG ATATGCCTAT TGTAACCATG
TTCTACCGTG AACGGTTCTA TGTAGTCCAA CCCTATGTTA AAGGACTGGA ACCCACCGGT
ATGGATGGCA CCATAATGGG TGATACGTCG TTTGTTAATG TTTCTATAGT CAAGTAA
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| Protein sequence | MKGKLLYLLA TLLIIVPIVF SGCTSDDNND DGDNGTVTTP QVFRVNLAGE PNTIDPNKAS
WATERSVIML LFVGLLDFNS DLSLKAACAQ EIPTVANGGI SADGLTYTFK VKSNVTWSDG
SKVTAHDFEY SIKRMLDPDT AAEYATFYYD IVGAAEFNGA ADADASTKTA LRNAVGVTAV
DDTTLRITLA QTRPTFLSIM ALWPTSPVKE SVITAKGTAW TEAGNLIGNG PYTLKEWVHQ
DHMTFTINQN YWDTKPTLTE IKYFMITDAT QEYSAYQNGE LDMARVPVGT ETAVLADSVY
GKHVVRNNDL TTFAFQFNVN KAPFDNLLVR QAMSCAIDRV AFVDQVRGGV GAPAYSWIPP
GMPGYDADLG KDFAFNVTKA KQLLADAGYP NGVGLPELKF QYADTASNRT IAQFLQAQLK
TNLNIDLTLE PMEPSAFSAF VNSEQHTWAW FGWGADYPDP DNWLPDLFGT GGGNNHTGYS
NPAFDALARQ AMMELDNTLR LQMWAQAQEM VMNDMPIVTM FYRERFYVVQ PYVKGLEPTG
MDGTIMGDTS FVNVSIVK
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