Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_761 |
Symbol | |
ID | 8657694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | + |
Start bp | 707181 |
End bp | 708317 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | |
Product | oxygen-independent coproporphyrinogen III oxidase |
Protein accession | YP_003330220 |
Protein GI | 270308162 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000202557 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGAAA ACAGCCTTGC TTTGTATATG CATTTCCCTT TTTGCCTTAA AAAATGCGGA TACTGCTCGT TTGTTTCTTA TACAAACAGG CTTGAACACA TATCTGATTA TGTAAACTGC CTGCAGAAAG AAATAAAACT GCGGACAGAT GGGCTTTGCT TCCACAGCCT GTATTTTGGC GGAGGCACAC CCAGTCTTTT ATCACCGGCG CAGATAGCAG ATATCATATC CGGTATAAAG ACTTCTGCCC GGATTTTACC CGATGCGGAA GTTACCTTAG AAGCAAACCC GGGTATTCTT ACCCTGCAGT ATCTTGAACA AATAAACCGC CTTGGCATAA ACCGCTTGAG CTTGGGTATC CAAAGTTTTT CAGATGCAGA ACTGGCAGTG CTGGGGCGTT TGCATAATAC CACCCAGGCA CGGGATGTAT ACAAAAAAGC CCGAGCCGCC GGTTTTGACA ATATAAACCT TGACCTTATT TATGGCCTGC CCCATTCTAC CCTTCTTTCT TTTAAGACCA ATCTCAATGA AGTGCTGAAA CTGGCACCGG AGCATATTTC ACTCTATGGT CTGACTTTGG AGGAAGACAC CCCTATGTAT CTGCAGGTAC AAAAAGGGTT ATTGCCCTTT ATGGATTCTG AAATTGCCGC TGACCAGTAT CAGCTGGCTG AAGAAATGCT GGATAATGCC GGATACCGTC ATTATGAGAT ATCCAACTGG GCTAAACCTG GATACCAAAG CCTCCATAAC CTCACCTACT GGCAAAACAG GCCATATCTG GGTTTGGGTG TAGCAGGGCA TTCATTTTTT CAAAATTGCC GTACAGCTAA TGATATAAAT CTTGATGAGT ATTTATTCTG CTGGCAGAAT AATTGTCCTC CTGAGCCATC TGAAAATATA CATGTAGACT TGGCTAATCA GCTGGCGGAA ACTATCATAC TGGGTCTTCG GTTGGATAAC GGGGTAAGTG CCGAATATGT GGAAAACCGT TTCGGCCCGT GCGTGATGGA TGTGTATTAT CCCCAGATTC AGGAATGTGT TGAGCTTGGG CTCTTGGAAG AACATGACAG ATGTATCCGC TTGACACCTA GAGGCCGTTT GCTTTCTAAC GAGGTTTTCT GGCGTTTCTT GCCTTAA
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Protein sequence | MTENSLALYM HFPFCLKKCG YCSFVSYTNR LEHISDYVNC LQKEIKLRTD GLCFHSLYFG GGTPSLLSPA QIADIISGIK TSARILPDAE VTLEANPGIL TLQYLEQINR LGINRLSLGI QSFSDAELAV LGRLHNTTQA RDVYKKARAA GFDNINLDLI YGLPHSTLLS FKTNLNEVLK LAPEHISLYG LTLEEDTPMY LQVQKGLLPF MDSEIAADQY QLAEEMLDNA GYRHYEISNW AKPGYQSLHN LTYWQNRPYL GLGVAGHSFF QNCRTANDIN LDEYLFCWQN NCPPEPSENI HVDLANQLAE TIILGLRLDN GVSAEYVENR FGPCVMDVYY PQIQECVELG LLEEHDRCIR LTPRGRLLSN EVFWRFLP
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