Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_738 |
Symbol | ilvD |
ID | 8657671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 686700 |
End bp | 688367 |
Gene Length | 1668 bp |
Protein Length | 555 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | dihydroxy-acid dehydratase |
Protein accession | YP_003330198 |
Protein GI | 270308140 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000109399 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGCG AAGATGTCAA ATCAGGTATT GAGCGTGCCC CTCACCGGTC TTTGCTGCGT GCCCTGGGTC TGAATACAGA AAGTTTCCAA AAACCCTTTA TCGGTATTGT AAACAGCTTT ACCGAAGTAG TCCCCGGACA TATTCACCTC AGACAGATTT CCGAAGCCGT CAAAGAAGGC ATAAATACTG CCGGCGGCGT AGGTTTTGAA TTTAATACCA TTGCGGTTTG TGATGGCATT GCTATGAACC ATGCCGGCAT GAAATACAGC CTGCCCAGCC GTGAAATCAT TGCCAACACA GTTGAGATTA TGGCTATGGC TCACGCTTTT GACGGACTGG TTTTTATACC TAACTGTGAT AAGGTTGTTC CCGGTATGCT CATGGCTGCT TGCCGTTTGA ACATTCCCTC TATATTTGTC AGCGGCGGCC CCATGCTGGC AGGACGTTTA AGGAAAAATG ACCAGGTCAG CTGTGTTGAT TTAAACAGTG TTTTTGAAGC TGTCGGTCAG GTGGCCAAAG GGCAGATGAC TGAAGAAGAA CTGCTGGAAC TTGAAAAAGT AGCCTGTCCC GGCTGCGGCA GCTGTGCCGG AATGTTTACC GCCAATACTA TGAATTGTCT TACCGAAGCA CTGGGCATGG CTTTGCCCGG CAACGGCACT ATACCGGCGG TGGATTCACG CCGCACACAG CTTGCTAAAA AGGCCGGCCA GCAGATAATG CACCTGATAA AAGATAATAC ACGCCCTAAA GATATAATAA CACCGGATGC CATTTACAAC GCTTTCAGTC TGGACGTAGC ACTGGGTGGC AGCACCAATT CGGTTCTGCA TGTTATGGCG GTTGCTCATG AAGCCGGGGC TGATTTTTCA CTGGAACAGA TAAACCGTAT AAGTGATTGT ACTCCTAATC TGTGCAAGCT CCGCCCATCA GGCCCATACC ATATTGAAAA CCTTGACCAG GCAGGCGGAA TAGGCAGCGT GCTGAAAGAG CTGAAACCAT GGCTGAAAAA TGATGCCCGG ACTGTCTCCG GCAAAACAAT AGACCAGTTG GCAGATGACG CACCCAAAGC CGATAATAAA GTCATTCGTT TTGCCTCAAA CCCGTATTCA CCCAAAGGCG GGCTGGCTAT TCTATTTGGA AATCTGGCAC CAAACGGCAG TGTAGTTAAA CGCTCTGCCG TTGCCCCGGA GATGATGGTT CACCGCGGGC CTGCCCGTAT ATTTGATTCT GAAGAGCTGG CTACCAAAGC CATTATGGGC GGTAAAATAA ACCCGGGTGA TGTACTGGTT ATCCGTTATG AAGGGCCTAA AGGCGGACCG GGTATGAGGG AAATGCTTAC CCCAACCTCG CTTTTGGCAG GTATGGGACT GGATAAAGAA GTAGCCCTGA TTACGGATGG GCGTTTTTCA GGTGCAACCC GAGGGGCCGC CATGGGACAT GTTTCACCGG AAGCAGCCGC CTCCGGTCCT ATAGCTGCCC TGCGTGACGG GGATATGATA AATATTGATA TCCATAACTA CAAGCTCTCA GTAGAGCTTT CAGATGAACA AATCCAGAAA CGTCTGGCAA ATTTGCCTGT GTTCGAGCCG AAGATAAAAA ACGGCTATTT GAAGTATTAT ACGGAAAATG TCACCTCGGC CAGTACCGGG GCGGTTTTTA AAGACTAA
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Protein sequence | MKSEDVKSGI ERAPHRSLLR ALGLNTESFQ KPFIGIVNSF TEVVPGHIHL RQISEAVKEG INTAGGVGFE FNTIAVCDGI AMNHAGMKYS LPSREIIANT VEIMAMAHAF DGLVFIPNCD KVVPGMLMAA CRLNIPSIFV SGGPMLAGRL RKNDQVSCVD LNSVFEAVGQ VAKGQMTEEE LLELEKVACP GCGSCAGMFT ANTMNCLTEA LGMALPGNGT IPAVDSRRTQ LAKKAGQQIM HLIKDNTRPK DIITPDAIYN AFSLDVALGG STNSVLHVMA VAHEAGADFS LEQINRISDC TPNLCKLRPS GPYHIENLDQ AGGIGSVLKE LKPWLKNDAR TVSGKTIDQL ADDAPKADNK VIRFASNPYS PKGGLAILFG NLAPNGSVVK RSAVAPEMMV HRGPARIFDS EELATKAIMG GKINPGDVLV IRYEGPKGGP GMREMLTPTS LLAGMGLDKE VALITDGRFS GATRGAAMGH VSPEAAASGP IAALRDGDMI NIDIHNYKLS VELSDEQIQK RLANLPVFEP KIKNGYLKYY TENVTSASTG AVFKD
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