Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_734 |
Symbol | leuA2 |
ID | 8657667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 681747 |
End bp | 683264 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | isopropylmalate/homocitrate/citramalate synthase |
Protein accession | YP_003330194 |
Protein GI | 270308136 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.368888 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACAAAA TAAAGATTTT TGATACCACC CTCAGAGATG GAGAACAGGC TGCCGGTGCG TCTTTGAATG CACAGGAAAA ACTGGAGATA GCCCGGCAGC TGGAAAAACT GGGGGTGGAT ATCATTGAAG CAGGTTTTCC CATCACCTCT CCCGGTGATT TTGAAGCGGT AAAGCTGATA GCCCAGGAAG TGCGCACCAC TGTCATCTGC GGTCTGGCCA GAGCTATACC GGCTGACATT GACCGTGCCT GGGAGGCTTT GAAAGAAGCT GCCCACCCCC GAATTCATGT GTTTATTTCT TCATCTGAAA TACACATGGT TCACCAGATA AAAAAGAGTC GTGAAGAAGT AATGGAGCTG GCGCGCACTA TGGTTGCCAG AGCCAAAAGC TATACTGATG ACATAGAGTT TTCACCTATG GATGCCAGCC GCTCTGACCC GGAGTTTCTT TATAAACTGT TGGAAGCAGT TATAGATGCC GGGGCTACCA CCCTGAATAT ACCTGATACT GTGGGTTACG CTATCCCCAG TGAGTTCGGC GAACTCATAA AGGGTATCCG CCAGAATGTG CCTAATATAA ACAAAGCGGT AATAAGCGTA CACTGCCACG ATGATTTGGG TATGGGTACA GCCAATTCGC TGGCTGCGGT TAAAAACGGT GCCAGACAGG TGGAATGCAC CCTGAACGGC ATAGGCGAAC GTGCCGGCAA TGCCGCACTG GAAGAAGTAG TGATGGCACT GCGCACCCGG AGTGATTTTT TCAATTTTGA AACAGGTATA AACACCCAGG AAATATACCG CAGCAGCCGC CTGGTCAGCG CTCTGACCGG TTTTGCTATT CAGCCCAACA AGGCTGTGGT GGGTGAAAAC GCTTTCCGCC ACCAGTCCGG TATCCACCAG GACGGCGTTA TTAAAATGGC TAAAACTTTT GAGATTATGG ACCCCAAAGA AGTGGGTATT CAGGCTTCCA GCCTGGTACT GGGCAAACTT TCCGGCCGCC ACGCCTTCAA ACAGCACCTG ACAGAGCTGG GCTTTGACCT GAACGAAGAA GATTTTGACC GCGCATTCAA GGCCTTTAAA GATTTGGCCG ATAAAAAGAA GGACGTGACT GACCGGGACA TAGAAGCGCT GGTTGCCGAA GAACTGCGGA CTACAGTTGA GCTTTATCAT TTGGACCGGA TTCAGGTTAC CTCCGGAGAC AGGGGCATAC CCACTGCTGC CGTCAGACTC ACCACCCCGA ACGGAGAGGC AGCAGAAGAT GCCGCTTTGG GCAGCGGGCC GGTAGATGCT GTTTACAAGG CCATAAACCG GATAGTAAAT GTACCTAACA AACTGACTGA ATTTTCGGTT AAGTCTGTTA CGGCCGGCAT TGACGCACTG GGTGAAGTGC TTATCCGTAT TGAGAGTGAC GGGGTAACAT ATACCGGACG CGGATCAGAT ACGGATATAA TAGTAGCCAG TGCCAAGGCT TATATGAACG CCTTAAACCG TTTGCTCAGG GTCAAGAACG CATCTTAA
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Protein sequence | MDKIKIFDTT LRDGEQAAGA SLNAQEKLEI ARQLEKLGVD IIEAGFPITS PGDFEAVKLI AQEVRTTVIC GLARAIPADI DRAWEALKEA AHPRIHVFIS SSEIHMVHQI KKSREEVMEL ARTMVARAKS YTDDIEFSPM DASRSDPEFL YKLLEAVIDA GATTLNIPDT VGYAIPSEFG ELIKGIRQNV PNINKAVISV HCHDDLGMGT ANSLAAVKNG ARQVECTLNG IGERAGNAAL EEVVMALRTR SDFFNFETGI NTQEIYRSSR LVSALTGFAI QPNKAVVGEN AFRHQSGIHQ DGVIKMAKTF EIMDPKEVGI QASSLVLGKL SGRHAFKQHL TELGFDLNEE DFDRAFKAFK DLADKKKDVT DRDIEALVAE ELRTTVELYH LDRIQVTSGD RGIPTAAVRL TTPNGEAAED AALGSGPVDA VYKAINRIVN VPNKLTEFSV KSVTAGIDAL GEVLIRIESD GVTYTGRGSD TDIIVASAKA YMNALNRLLR VKNAS
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