Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_730 |
Symbol | leuB |
ID | 8657663 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 678389 |
End bp | 679486 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | 3-isopropylmalate dehydrogenase |
Protein accession | YP_003330190 |
Protein GI | 270308132 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000128158 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGATTTCA AACTGACAGT TCTGCCCGGT GACGGCATAG GCCCGGAAGT TATGGCCGAA GGTTTGAAGG TGCTTAATGC TGTTGCAAAA AAATACAAAC ATAGATTTGA ATATCAGTAC GGACTTATCG GCGGCTGCTG TATAGATAAA GAGGGGGTAG CACTCAGCCC TGAGACACTG GCCATGTGCA AAAAGTCTGA TGCTGTTATA CTGGCGGCAG TAGGTGACCC CCGCTTTGAT GACCCAAAAT TGCCGGTTCA CCCTGAAGAC GGTTTGCTGG CCTTAAGACG CGGCCTTGGT CTTTTTGCCA ATATCCGCCC GGTCAAGGTG GCTCCTTCGC TGATAAATTC CGCTCCCGTA AAAGCCGAAA TAATAAAAGG CACTGACTTT ATATTTATAC GGGAGCTGAC CGGTGGTGTT TATTTTGCCA AGCCGAAAAA ACGCTGGACT ACACCTTCGG GCATCCGCAA AGCTACTGAC AGCATGACCT ACTCCGAAAA GGAGATTGAA CGAATTGTGC GTGTTGGCTT TGAATTGGCA CGAAGCCGCA AAAAGAAACT GGTCAGCGTA GACAAAGCCA ATGTGCTGCT GTCTTCACGC TTGTGGCGGC AGATAGTTAT AGAACTAGCA AAAGATTATC CTGATGTAAC AGTGGAACAT ATACTGGTTG ATGCCTGTGC CATGAAATTG ATACTTTCGC CCACTTATTT TGATGTTATT GTGACTGAAA ATATGTTTGG CGATATTTTA ACAGACGAAG CCTCCATGCT GGCAGGATCT ATGGGCATGC TGCCCTCTGC CTCTTTGGCA GGCATACCGG CAAAAGGCAC TAAAACTTTC GGCCTTTACG AACCTATTCA CGGCAGCGCC CCCACTATTG CTAAACAAAA TATTGCCAAC CCCATTGCCA CCATTTTAAG CATAGCCATG ATGCTTCGCT ATTCCTGCGG GCTGGAGGCC GAAGCTGCTG AAATCGAGGC GGCGGTTGAC AAGGTTCTAG CGGCTGGTTA TGCTACGATA GATATATTTA AAGAGGGCAA CACCAAGCTC GGTACAGCCG AGATGGGCAG CCAGATAGCT AAAACGATAG GAGGCTAA
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Protein sequence | MDFKLTVLPG DGIGPEVMAE GLKVLNAVAK KYKHRFEYQY GLIGGCCIDK EGVALSPETL AMCKKSDAVI LAAVGDPRFD DPKLPVHPED GLLALRRGLG LFANIRPVKV APSLINSAPV KAEIIKGTDF IFIRELTGGV YFAKPKKRWT TPSGIRKATD SMTYSEKEIE RIVRVGFELA RSRKKKLVSV DKANVLLSSR LWRQIVIELA KDYPDVTVEH ILVDACAMKL ILSPTYFDVI VTENMFGDIL TDEASMLAGS MGMLPSASLA GIPAKGTKTF GLYEPIHGSA PTIAKQNIAN PIATILSIAM MLRYSCGLEA EAAEIEAAVD KVLAAGYATI DIFKEGNTKL GTAEMGSQIA KTIGG
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