Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_718 |
Symbol | |
ID | 8657651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | + |
Start bp | 668209 |
End bp | 668991 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | |
Product | ABC transporter, permease protein |
Protein accession | YP_003330179 |
Protein GI | 270308121 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000115983 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCAGTCT GGAAGATGCC TTTTTGTATT CCATCCGCAC AGGAGGTGCT CTCAGCCATG AATAATATAC TGGCTATTGC TCAGAGGCTT ATCCGCCAAT TGCTCCATGA CCGGCGGACT ATGGCGCTGA TAATAGTAGT TCCGGTGGTG GTTATGGGGC TTATAGGTAT CAGCTTCCCT GATGCAACAG TGCTTGATTA TATTGCCCCG GCCATGCTGG CAACGCTGGC CTTATTTTTC AGTTTCCTGC TGACTGGCAT TTCATTTCTG AGGGAAACAT CTCAGGGTAC TATGGAAAGG CTTATGGCTG CACCCGTTTC CCGTCTGAAC ATAGTTGCTG GTTATCTTTT GGGTTTCTTC GTGTTTGCCT TGCTGCAAAC TCTTATCATT GTGCTTTTTA CTATCTATGT GCTGGGAGTT AACTTTCAGG GTGAACTCTG GCAGATACTA CTCTTTCAGG TGCTTATTAT TACCGGGGCG GTGACCCTGG GCATTTTCAC CAGCAGTTTT GCCAAAAATG AATTCCAAAT GGTTCAGTTC ATACCGCTTA TTATTGTTCC CCAGATATTT CTGTGCGGTG TCATCTGGCC GGTTTCCCAG ATGCCGGAGT GGCTTCAGTA TCTGTCAAAT ATATTACCGC TGACTTATAG TGTGGATGGC ATGCGTGAAA TAATGCTTCA GGGCAAAAAT CTGACTGAAT TAGGGTTTCA GTGTGGCGTT TTGATACTGT TTGCGGTTAT TACTACTGTT TTGGCAACAC TTACCGTACC CAAACGCCGC TAA
|
Protein sequence | MPVWKMPFCI PSAQEVLSAM NNILAIAQRL IRQLLHDRRT MALIIVVPVV VMGLIGISFP DATVLDYIAP AMLATLALFF SFLLTGISFL RETSQGTMER LMAAPVSRLN IVAGYLLGFF VFALLQTLII VLFTIYVLGV NFQGELWQIL LFQVLIITGA VTLGIFTSSF AKNEFQMVQF IPLIIVPQIF LCGVIWPVSQ MPEWLQYLSN ILPLTYSVDG MREIMLQGKN LTELGFQCGV LILFAVITTV LATLTVPKRR
|
| |