Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_701 |
Symbol | |
ID | 8657634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | + |
Start bp | 656077 |
End bp | 657159 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | ABC transporter, permease protein |
Protein accession | YP_003330166 |
Protein GI | 270308108 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.222918 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTCAT TTTTAAATAT GCTAAATGCC AATTTCAAGC AATTTCTCCG GGACAAGACT GCTTTGTTTT TTACCCTGGC TTTCCCGGTA CTCTTTATCA TTATGTTCGG GTTGGTTTTC AGCGGTACAG ACAAGATTAA TTATGATGTT GCCCTGGTAA ACGAAGACGA TTCGCAGATA AGTCAGGGTA TAGTTCAGGC TTTCAGTCAG GTAAGCATAT TTTCAGTCCA AGATAACCCG CGGGATGAAA GTCTGCAGCT TCTTGCAGAC GGTAAACTCA AGGCGGTTAT AATATTGCCT GAGGGTTTGG GGCAGGCGGC TCTGTCCGGG CAAACTACCG ATGTGCAGGT CTATTATGAC GGCTCTCAAA CCAGCGTAAA TCAGATTGTT TTGCCGGTGG TCAAGGAGAT ACTTCAGAGT ATAAACCGTG AGATAACCCA GACTCCTGTT TTGTTTCAGA TAACCGAAGA GACTATCCAA ACCAAAGATA TGAGCATGAT GAGTTTCTTT ATCCCCGGTG TGCTGGCCAT GTCTATCATG TTCCTGGGAA TTTATTCGGC CATGCCGCTT ATCCAGCAGC GGGAAAAGAA GATTTTGAAA CGGCTGGGTG CTTCACCTAT TTCTCGCTCA ACTATTATAT TCAGTCAGGT GGTGCTCAGG CTGGGGCTGG CTGTGCTTCA GACCGTTATC ATTATAGTTA TCGGGCAGCT CATGTTCGGC GTTGAGATTT TAGGCAACTG GTGGCTGCTG TTAGGGCTGG TGATGCTGGG AACGCTGTCA TTTATCAGCC TGGGTTTTCT GGTGGCTTCA CTTGCCAAGA CTGAAGAAGG GGCAATGCCC ATTGTGCAGC TTATCCAGTT CCCCATGATG TTCCTTTCCG GCATTTTCTT TCCGCTGGAA TATATGCCTG ATTTTATGCA GCCGGTGGTA AATGCTTTAC CGCTGACCTA TTTGGGTGAT GCCTTCAGAC AGGTAATGGT AGACGGAGCT CCCGCTTTTC CGCTGGGGGT TGATTTGCTG GTAGTCACAG GCTGGCTGGT GGTCTGTATG GTTATCTCAG TCCGCTTTTT CCGCTGGGAA TAA
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Protein sequence | MNSFLNMLNA NFKQFLRDKT ALFFTLAFPV LFIIMFGLVF SGTDKINYDV ALVNEDDSQI SQGIVQAFSQ VSIFSVQDNP RDESLQLLAD GKLKAVIILP EGLGQAALSG QTTDVQVYYD GSQTSVNQIV LPVVKEILQS INREITQTPV LFQITEETIQ TKDMSMMSFF IPGVLAMSIM FLGIYSAMPL IQQREKKILK RLGASPISRS TIIFSQVVLR LGLAVLQTVI IIVIGQLMFG VEILGNWWLL LGLVMLGTLS FISLGFLVAS LAKTEEGAMP IVQLIQFPMM FLSGIFFPLE YMPDFMQPVV NALPLTYLGD AFRQVMVDGA PAFPLGVDLL VVTGWLVVCM VISVRFFRWE
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