Gene DhcVS_688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhcVS_688 
Symbol 
ID8657621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. VS 
KingdomBacteria 
Replicon accessionNC_013552 
Strand
Start bp642752 
End bp643810 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content49% 
IMG OID 
ProductThiE-associated domain protein/thiamine-phosphate pyrophosphorylase 
Protein accessionYP_003330153 
Protein GI270308095 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value7.36904e-05 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATAATC TTGAAAAACT GTGGCGGATA GTTGATGTTA ACCAGAACCG CTTAAGTGAA 
GGGTTGCGGG TACTGGAAGA GATTGCCCGT TTATACCTTG AAGATGAAAA GCTTAATTCA
CGTTTCAAAA ACCTGCGTCA CTCACTTACT TTGCAGGATA TTGCTTCCAA TTCCCGTCTG
TTATTTTCCC GCCAGGCTGA TACTGATATC GGCGCTCAAT TAGAAACAGC TGACCAGTCC
GAACCTGAAA CCTTATTTTC GCTTGTAAGT GCCAATGCCA AGCGGGCAGA ACAATCCCTG
CGGGTTTTGG AAGAGTTTGC CGGTTTACCT GAGACGGGTC TTGATGCCGC TCTCTACAGC
CGCGGGCGTT TTGAACTTTA TACCCTTGAA AAAGACCTGG CGGCCAGGCT TTTGCGTACA
AACCGCCGGG ATATGATAAC GGGGTTGTAT GTGGCTATAG ATGCAGATTA TCTGGCCGGG
CGGGATATAA CTGCAGTTAC CAGAGAAGTG CTTGAGGGCG GTTGCCGCCT TATCCAGCTT
AGGGCTAAAA CGGCCTCTAC CCGAAAGTTT TTGGCACTGG CCGTAAGCTT GAAGGAAATT
TGCCTTGAAT ACGGTGCGCT CTTTATTATA AATGACCGCT TGGATATTGC CCTTGCCTGC
GGTGCGGATG GGCTTCATCT GGGGCAGATA GATATGCCGC TTTCGCAAGC CCGCCATTTT
ATGCCGCCGG ATAGCATTAT AGGTATTTCT GCGGATACGC CCGAACAAGC TATTTGGGCT
CAAAATGAAG GGGCTGACTA TGTGGCTGCC GGGGCGGTTT TTCCCACCCA AACTAAACAA
GATGTCCTTT TCGGCGGCCT TTCAGGTTTA CAGGCCATTC ACCAAGTGGT AAAAATACCT
CTGGTGGCTA TTGGCGGCAT AAACAAGTCG AATTTTTATG AAGCCATGCA GGCAGGTGCG
GGCAGTCTCT GCCTGATAAG TGCGGTCTTA GGTGCGCCTG ATATTAAAAA GGCTACTTCT
GAATTTATAA CCCTTATGGA GGCAGCAAAA ATTGACTAA
 
Protein sequence
MDNLEKLWRI VDVNQNRLSE GLRVLEEIAR LYLEDEKLNS RFKNLRHSLT LQDIASNSRL 
LFSRQADTDI GAQLETADQS EPETLFSLVS ANAKRAEQSL RVLEEFAGLP ETGLDAALYS
RGRFELYTLE KDLAARLLRT NRRDMITGLY VAIDADYLAG RDITAVTREV LEGGCRLIQL
RAKTASTRKF LALAVSLKEI CLEYGALFII NDRLDIALAC GADGLHLGQI DMPLSQARHF
MPPDSIIGIS ADTPEQAIWA QNEGADYVAA GAVFPTQTKQ DVLFGGLSGL QAIHQVVKIP
LVAIGGINKS NFYEAMQAGA GSLCLISAVL GAPDIKKATS EFITLMEAAK ID