Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_660 |
Symbol | |
ID | 8657593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 618046 |
End bp | 620577 |
Gene Length | 2532 bp |
Protein Length | 843 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003330127 |
Protein GI | 270308069 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000729643 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGGAA AGAAAAACAT TTCTTCAAAT AATGAACCTG TTGCCCAACC CAAGATTTTA ACTAAACCTT TACCCCAAAT CCTGGATGAA ATGGATGCCA ATATACGCGC TGCTGCTGAA GCTGCCCGCA GGGCACAAGA AGCGGCTGTC ACTGCAGGTA AAGCAGCTGA AAGTGCTACT CAAGCTGCCA ATCTGGCTGA AAAAAGGGCT GAAGATGCCC GTCTAGCTGG CGAAAAAGCG GCCGAAACCG CAACCAGAGC TGCTGCCGAA GCTGCTGCTG CAGCCGAAAA AACTGCTAAA TTAGCCACCA ACGCCGCCAA TGAAGCCCTG AAAGCTGCTG AATTAGCCTC GCGTAAGGCC GAAGATGCTG AAAGAGGGGC GGCTAAGGCT GCTGAAGATT TTAAAAAGGT AGCGGAAGAA GCCGCCAGAA GGGCAGAGGC CGCAAGCCAA GCTGCGCGTG ATGCAGCAGA TAATGCCATG CTTGTAGCTG AGTCTGCCGC TCAAAGGGCG GAAGACGCCG GTGAGAATGC CCGCCAGGCA GCTGAGAAAG CTATCCGCGA AGCTCAAGAT GCCACTATCG CAGCTATTCA AGCTTCCGAA CTGGCTACCA GAGCTGCAGA AGATGCTGCT CACAGAGCCG AACAGGCCTC TGCTTTAGCC AGAAAAACCG CCGAAGAAGC TACCAATGCC TCACGAGAAG CAGTACTCAA AGCTGAAGAA GCTGCCCGTA AAGCCGAAGC CGCCAGCTTG GCTGCTACTA ATGCAGCTGA AAATGCTATG AAATCTGCAA GCGAAGCTGC CAAAAGGGCA GAAGCCGCCA GTCTGGCAGC CAAAGAAGCT GCCGCCATGG CTACCGCAGC TGCTCAAGCC GCTGCCAAGA AAGCAGAGGA AGCCAGTGCT ATAGCTAAAT CTGCTGCCGA ACAGGCTATA AAAGCCGCTA ACGATGCTGC TCTTAGAGCA GAGGCGGCTG CCAAAGCCGC TGCTTTAAAA GCAGAAGAAG CCTTTTTGGC TTCCAAAAAA GCTGCCGCTG AGGCTATAGC CACAGCTAGC GAAGCCGCCA TGTCTGCGGC GATGAAATCT GAGGCGGCTG TTGCCGCTGC CAAATCTTCA GCTGAAAAAG CTATTTTAGT AGCTGAAGAT GCTGCCCGCA AAGCTGAAGC TGCTGCCGCC GAAGCATCTA GAAAAGCTGA AAACGCCAGT TTGCATTCCA CTCAAAAAGC TGAGGATGCC ATAAAAGCTG CTGATTTAGC AGCCAAACGT GCAGAAGCGG CTGCTTTGGC TGCTACCCAA AAAGCCGAGG AGGCTGTCAA AACTGCCGGA GAAGCCGCCA AACTAGCTGC TGCCAACGCT ACGAATGCCG CTAATGAAGC TGCCAAGAGA GCCGAAGCTG CTGCTGCCGC TGCCGCAAAG AAAGCTGAAG AAGCGATAAC GGCTGCCAAA CTGGCAGCTG ATGAGGCTGT AAAGGCTGCT ACCAAAGCCG CCGAAGATGC TGCCAAGAAG GCTCAACTGG CTGCGGAGGA AGCCACCCGC AGGGCTGAAC AAGCAGCCGC TGCTGCTGCC GCTGCCGCCG CTGCCGCCGC TTTGAGAGCC GAAGAGGCTG CTTACAAGGC TGAAGATACC GCCAAAGCCG CCAAATTGGC TGCGGAAGAG GCTACCAACC GGGCAGACGA AGTAGCACTA ACTGCCAAGG AAACTGCTCT GGCCAATAAA AAGGCTGCCG AGGCAACTGC CATCCGTGCC AGCCAGATTG CTATAACCGC CAAGACAGAC CTTGATAAAA CTATTCTGGC CGCAAATAAA GCTGGAAATA ATGCTACCGA AGCCACTGCT GCCGCTAAAG AAGCCACTGC TGCCGCCAAT ACCCGAAAAG ATGCTGACAG TGCCCGCAAG GCAGATGAAG CTGGACGCAA AGCCAAAATG GCGGCTACTG CCGCCCTCCA GCTAGCTGAA GAAACTGCCC GCAAGTCATC TTTGGCTGAG ATAGCCGGAG ATGAAGCCCT TGAAGCCGCA ACCAGAGTAA GCGGTGATAT TGCCAAACGG GCTGAAGATG CCGGTTATGC CGCTAAGGAA TCCGCCAAGT CAGGATTCAA GGTAGCTGAA GAAACCCGCA AGAAGGCTAC ACTGGCCGAC GAGGCCGGAG ATGCCGCAAT TCATGCTTCA ATGAGTATTA TTCAGGAACT CATAAACAGA GCTGAACAGG TAGGTATTGA TGCCAAGCGT TCAGCCGAAG ACTTTGCCCG GATATCACGC TCACAGGCAG AAGCCATGAT GCGTGACGCC CAGATGAAAG CCGCCGCCGA GGTTGAAAAA GCCCGCCGTG CTGCCGAAGA TGCCGGTGCC AAAGCAGAGA GTATTGCCAA CGCAGCTAAA CTAGCTGCCG AAGAAGCCAT GAGTAAAGCT CAGGAAGCTC TGGTAAAAGC TGTCATTAAA CGCCTTACCA GCTGGGAGTG GATTTCAATC CTGGTTATCA TAAACTTAAG TATAGTTTTT GCAGCCGTAC TCCTGGCTAC CGCCTTCGGC GCGCTTATCT GA
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Protein sequence | MEGKKNISSN NEPVAQPKIL TKPLPQILDE MDANIRAAAE AARRAQEAAV TAGKAAESAT QAANLAEKRA EDARLAGEKA AETATRAAAE AAAAAEKTAK LATNAANEAL KAAELASRKA EDAERGAAKA AEDFKKVAEE AARRAEAASQ AARDAADNAM LVAESAAQRA EDAGENARQA AEKAIREAQD ATIAAIQASE LATRAAEDAA HRAEQASALA RKTAEEATNA SREAVLKAEE AARKAEAASL AATNAAENAM KSASEAAKRA EAASLAAKEA AAMATAAAQA AAKKAEEASA IAKSAAEQAI KAANDAALRA EAAAKAAALK AEEAFLASKK AAAEAIATAS EAAMSAAMKS EAAVAAAKSS AEKAILVAED AARKAEAAAA EASRKAENAS LHSTQKAEDA IKAADLAAKR AEAAALAATQ KAEEAVKTAG EAAKLAAANA TNAANEAAKR AEAAAAAAAK KAEEAITAAK LAADEAVKAA TKAAEDAAKK AQLAAEEATR RAEQAAAAAA AAAAAAALRA EEAAYKAEDT AKAAKLAAEE ATNRADEVAL TAKETALANK KAAEATAIRA SQIAITAKTD LDKTILAANK AGNNATEATA AAKEATAAAN TRKDADSARK ADEAGRKAKM AATAALQLAE ETARKSSLAE IAGDEALEAA TRVSGDIAKR AEDAGYAAKE SAKSGFKVAE ETRKKATLAD EAGDAAIHAS MSIIQELINR AEQVGIDAKR SAEDFARISR SQAEAMMRDA QMKAAAEVEK ARRAAEDAGA KAESIANAAK LAAEEAMSKA QEALVKAVIK RLTSWEWISI LVIINLSIVF AAVLLATAFG ALI
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