Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_659 |
Symbol | thrS |
ID | 8657592 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 616171 |
End bp | 617919 |
Gene Length | 1749 bp |
Protein Length | 582 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | |
Product | threonyl-tRNA synthetase (thrS) |
Protein accession | YP_003330126 |
Protein GI | 270308068 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000328118 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAACC AAATAGATGA ATCAAAGCCC ATAAGCGACC TTGAAATCAT GCGTCACTCC GCCGCCCATA TTATGGCTGA AGCGGTCTTG TCCATGTTTC CTGAGGCCAA GCTTGGCATA GGGCCGGCTA TTGATACCGG TTTTTACTAT GATTTTGACC TGCCCCGCAC CCTCACACCA GAAGACCTGC CTGAAATAGA AACCCGGATG AATCAGCTGG TAAAGGCTAA TCTGCCTTTC AGGCGTGAAG AAATGTCTAA AGATGAAGCC CGAAAACTTT TTGCCGACCA GCCGTATAAA CTGGAGCTAC TGAATGATAT CCCTGACGAA ACCGTAAGTA TTTACCGTCA GGGTAACTTT TGTGATCTCT GCCGCGGGCC TCACGTCAAC TACACCAGCA AGGTAAAGGC TTTTAAGCTT TTGTCTATTG CAGGTGCCTA CTGGAGAGGT GACGAAAAAC GCCCCATGTT GCAGCGTATA TACGGGGCAG CCTTTTTGGA TAAAGCCTCT CTGGCAGACT ATTTGAATAT GATTGAAGAA GCCGCTAAAC GCGATCACCG TAAACTGGGC AAAGAACTGG AGCTGTTTTC ATTACATCAG GAAATAGGGG GCGGTCTGGT AAACTGGCTG CCAAACGGTG CTACAATACG ACACCTGATT GAAGAATTCT GGAAAAAAGA GCACCTCAAA CGGGGTTATA ATCTGGTTTA TACCCCCCAC ATAGCCAAAG TAGACCTCTG GAAAACAAGC GGGCACTGGG GTTTTTACCG CGAAAATATG TATAGCCCTA TGGATATTGA CGGCGAAGAG TATGTACTTA AGCCAATGAA CTGTGTTTAC CATATCCTCA TGTTTAAAAA CCGCACCCGC TCATACAAAG AACTGCCTAT CCGTATGGCT GAACTGGGTA CTGTTTACCG TTATGAACGC TCAGGTGTTT TACACGGACT TTCAAGGGTA CGCGGTTTTA CCCAGGATGA CGCCCATATA TTCTGTTTAT ATGAACAGTT GGAAAAAGAA GTTGTAAAGG TTCTTGATCT GGCAAAATTC ATGATTGACA CCTTCGGCTT TGCCAAATAC AAGGTTATGC TTTCAACTCG TCCCGAAAAA TATGTGGGCG AGTTGGCTAA ATGGGAATAT GCCACTGATA TTTTGGCAAA AGCTCTGGAA GCCAACGGGA TTTCTTATCA GGTAGACCCT GGAGAGGGTG TCTTCTACGG CCCCAAGATT GACATAAAAT TCGAAGATGC CTTGGGACGC GCATGGCAAG GACCAACTAT TCAAGTGGAT TTCCAATTGC CCGAACGTTT TGAAGTTAGC GTGGTAGGGG AGGACGGCAA GGACCAGCCG GTAGCTATGG TGCACCGCAC AGTACTAGGC AGCATGGAAC GGTTTATGTC CTGTTTAACC GAACAATATG GTGGTGCTTT CCCTGTCTGG CTGTCACCAA AGCAGGTTAT GATAATACCC ATTGCCGATA GGCATAGCGA ATTTGCTGAA AAACTGGCTT GTGAACTCAG GGAAGAAGAG GTTAGGGTAG AGGTAGATAA TCGCTCCGAA ACTATGAACC AGAAAATCCG TCAGGCTCAA CTTGCTAAGA TACCATACAT GCTGGTAGTT GGAGACAAAG AGATTGAAAC CGGGAGTATA GCCCTGAGAA GTCGTATCGG CAGCCAGCAG GTAATGCCGT TTGCAGAGTT CAAATCTATG CTCCTTAATA AAATAAAAAC CAAGTCTACA GAGATTTGA
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Protein sequence | MANQIDESKP ISDLEIMRHS AAHIMAEAVL SMFPEAKLGI GPAIDTGFYY DFDLPRTLTP EDLPEIETRM NQLVKANLPF RREEMSKDEA RKLFADQPYK LELLNDIPDE TVSIYRQGNF CDLCRGPHVN YTSKVKAFKL LSIAGAYWRG DEKRPMLQRI YGAAFLDKAS LADYLNMIEE AAKRDHRKLG KELELFSLHQ EIGGGLVNWL PNGATIRHLI EEFWKKEHLK RGYNLVYTPH IAKVDLWKTS GHWGFYRENM YSPMDIDGEE YVLKPMNCVY HILMFKNRTR SYKELPIRMA ELGTVYRYER SGVLHGLSRV RGFTQDDAHI FCLYEQLEKE VVKVLDLAKF MIDTFGFAKY KVMLSTRPEK YVGELAKWEY ATDILAKALE ANGISYQVDP GEGVFYGPKI DIKFEDALGR AWQGPTIQVD FQLPERFEVS VVGEDGKDQP VAMVHRTVLG SMERFMSCLT EQYGGAFPVW LSPKQVMIIP IADRHSEFAE KLACELREEE VRVEVDNRSE TMNQKIRQAQ LAKIPYMLVV GDKEIETGSI ALRSRIGSQQ VMPFAEFKSM LLNKIKTKST EI
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