Gene DhcVS_573 details

Gene Information

• Locus tag: DhcVS_573
• ID: 8657509
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. VS
• Kingdom: Bacteria
• Replicon accession: NC_013552
• Strand: +
• Start bp: 541013
• End bp: 541777
• Gene Length: 765 bp
• Protein Length: 254 aa
• Translation table: 11
• GC content: 48%
• Product: cation ABC transporter, ATP-binding protein
• Protein accession: YP_003330050
• Protein GI: 270307992

Plasmid Coverage information

• Num covering plasmid clones: 49
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTGACA CACCAGCCCT GGTGTTTAGG GGAGTTAGTG CCGGTTTTGA CGGCCTTACG 
GTACTGGAAG ATATTACTTT TTCCCAGCCT GCAGGACGGA TGCTGGGGAT TATAGGCCCG 
AATGGCGGAG GAAAAACTAC CCTCCTAAAG CTGATTTTGG GGCTCATCCA GCCTGATTGC 
GGCACTATAC AGGTGCTTGG CAAGAGCCCT GAAGATGCAA GGCCGGAAAT AGGTTATGTT 
TCCCAATACC ATCTTTTTGA CCGTGATTTT CCCATAAGTG TTTTGGAAGT GGTACTCATG 
GGCAGGTATG CCAAAAGGGG TTTAGCCCGC CGCTACTCCA GTGGGGATGT GGCCTTGGCT 
AAGGAGTATC TGGATAAAGT GGGTATGCTG CCGTTTGCTA ACAGGCAGAT TGGCCAGCTT 
TCAGGCGGTC AGCAAAAGAG GGTATTTATT GCGCGGGCGT TGGTTAATCA GCCGAAACTG 
CTTATTCTGG ATGAACCGAC TGCCGGGGTA GATGCCGCCA TGCAAACCGG GCTGTATGAA 
CTTTTGGAAT CATTGAAAAA AGAGATGACT ATTATTATGG TTACCCATGA TATCAGTGCG 
GTGGCAGTTT GTATAGATGA TATTGCCTGT TTAAATAAAC ATTTATCATA CCACCATGCC 
GAAGAGGGAT TGACCGCTGA AGATTTGGCA GAAACTTACA ATTGCCCGAT TCAGCTTATT 
GCACACGGAC AAGTGCCGCA CAGGGTATTA AAGGAACACG AATGA 

 

Protein sequence

MSDTPALVFR GVSAGFDGLT VLEDITFSQP AGRMLGIIGP NGGGKTTLLK LILGLIQPDC 
GTIQVLGKSP EDARPEIGYV SQYHLFDRDF PISVLEVVLM GRYAKRGLAR RYSSGDVALA 
KEYLDKVGML PFANRQIGQL SGGQQKRVFI ARALVNQPKL LILDEPTAGV DAAMQTGLYE 
LLESLKKEMT IIMVTHDISA VAVCIDDIAC LNKHLSYHHA EEGLTAEDLA ETYNCPIQLI 
AHGQVPHRVL KEHE