Gene DhcVS_56 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhcVS_56 
SymbolclpC 
ID8657010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. VS 
KingdomBacteria 
Replicon accessionNC_013552 
Strand
Start bp50378 
End bp52852 
Gene Length2475 bp 
Protein Length824 aa 
Translation table11 
GC content51% 
IMG OID 
ProductATP-dependent Clp protease, ATP-binding subunit 
Protein accessionYP_003329558 
Protein GI270307500 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAGTA GATTTGATAA ATTTTCTGAA AGAGCGCGCC GGGTTCTTAC CTATGCACAG 
GAAGAGGCCC AGAACCTTAA CCATAACTAT ATCGGTACCG AGCATATTCT GCTGGGGCTG
GTAAGGGAAG AAGAAGGCGT GGCTGCTCGA GTACTGGTCA ACATGGAAGT AAATTTGGCC
AAAGTACGTT CTGCCGTTGA ATTTATACTT GGGCGGGGCG AACACCCGGC TACCTCTGAA
ACCGGTCTTA CCTCCAGAGC CAAAAAGGTA ATAGAACTGG GTATTGATGA AGCCAGAAAC
TTGGGGCACA ACTATATCGG CACTGAGCAC CTGCTTTTAG GTTTACTGCG CGAAGGTGAA
GGAGCAGCAG CCGGTGTGCT TGAGAGTTTC GGGGTTACTG TTGAAAAGGT ACGCACCGAA
GTGGGGCGTA TTTTAAATCA GGGCTTAAAT AAACCTAAAA CCAGCCGTAC AACTCCCAGC
CGGACCCCCC AGCTTGACCA GCTGGGCTTT GACCTTACGG CTGCTGCCAG AACCGGCAAG
CTTGACCCGG TTATCGGTCG TGCCAAAGAA ATAGAGCGGG TCGTTCAGAT TCTTTCCCGC
CGCACTAAAA ATAACCCTGC CCTTATCGGC GAACCCGGTG TCGGCAAAAC CTCCATTGTA
GAGGGGCTGG CCCAGCGGAT TGTTTCGGGT GATGTTCCGG AAACTTTGGA GCAGAAACAT
ATAATCTCGC TGGACGTGGC CTCACTGGTA GCCGGTACTA AATACCGGGG TGAATTTGAG
GAACGGCTCA AGAAAGTTAT TGAAGAAATT AAAAACGCAG GCAATATAAT CCTGTTTATA
GACGAATTTC ATACCATGGT GGGTGCCGGT GCCGCCGAGG GTGCGGTAGA TGCCGCTAAT
ATCCTCAAGC CTTCGCTGGC CAGAGGCGAG GTACAGGTAA TAGGGGCAAC TACCCTGGAT
GACTTTCGCA AATATGTTGA GCGGGATGCC GCACTTGAGC GGCGTTTCCA GCCGGTGCTG
GTGGAAGAAC CGGCCATAGA AGATACCCTG AATATTCTTC GCGGCATAAA AGAGCGCTAC
GAAGAGCATC ATAAGCTTAT CATCAGCGAA GAAGCTATTG CCGCTGCCGC CAATATGGCT
GCCAGATATA TACCTGACCG CTTTTTGCCG GACAAGGCTA TAGATTTAGT TGATGAGGCC
GCTTCACGGG TGCGGATAAA GAAACGCACC AAGCCGGTCT CTTTGAAAGA GATGAAAGCC
ATAGAAGACA GCTACCGCCG GGATAAAGAA GCCGCTTTGG CAACCCAGCA GTATGACTAT
GCTTCCGAAT TGCGTGAGCG TGAGCTTCAG ATAGCTGAAA AGATACGCCG CATGGAAGAC
GAATGGCAGA ACGAACAGGC TATGGACAAG CCGGTAGTGG GCGAAGAAGA TATTGCCCAG
GTAGTCAGCA TGTGGACGGG TGTGCCGCTG GTACAGCTTA CCGGTGACGA AACCGAACGT
CTTTTACATA TGGAAGAAGC CCTGCATGAG CGGATTATCG GCCAGGAAGA AGCTATTGTT
ACCATATCCA AGGCTGTCAG ACGGGCACGG GCCGGTCTTA AAGACCCCCG CCACCCCATC
GGCAATTTTG TTTTCCTCGG GCCTACCGGC GTGGGTAAAA CCGAGCTGGC ACGGGCGCTT
GCCCAGTTTA TGTTTGGTTC GGAAGATGCT TTGGTTCGGC TGGATATGTC CGAATTTATG
GAAAAATTTG CCGTATCCCG TCTGGTGGGT GCGCCTCCCG GATATGTGGG TTATGATGAG
GGCGGTCAGC TGACTGAAGC CGTTCGCCGC AAGTCGTACT GCCTGATACT GTTGGACGAA
ATAGAAAAAG CTCATCCTGA TGTTTTCAAC ATACTTCTGC AGATATTTGA TGACGGCCAC
CTGACAGATG CCAAGGGCAG AAGGGTGGAT TTCAGGAATA CCATTATTAT CATGACCTCA
AACATTGGGG CTGAGCTTAT CCGCAAGGGC AGCGGGACTA TCGGTTTTGC TACCCAGACA
GATGAATCAA AGGCTCAGCA AACTAACTTT GAGCATATGA AAGACAAGCT GCTGGGTGAG
CTCAAGAAGA GTTTCCGTCC GGAATTCTTG AACCGCATTG ACAGCGTGGT GGTTTTCCAC
TCGCTGAACA AAGAGCAGAT TCGCAGCATT GTTGACCTGA TGCTTAAGAG TGTTATCAAG
CAGATGTCTG AAAAGGGTAT CGGGCTTGAA GTGACTGAAT CTGCCAAAGA CCTGCTGGGC
AAGAAAGGTT ATGATGAGGT TTATGGTGCA AGGCCGCTGC GCCGCACTAT ACAGACCATG
ATAGAAGATC GTCTGTCCGA GGACCTTCTG CGGGCTAAAT TTAAAGCTGG GGATAAAGTG
ATAGTGGATA TTGCTGAAGA TGAAATAATT GTCCGTCTGG CAGAGCCGGC TGAGCTTAGT
CAGGCTACTT CGTAA
 
Protein sequence
MSSRFDKFSE RARRVLTYAQ EEAQNLNHNY IGTEHILLGL VREEEGVAAR VLVNMEVNLA 
KVRSAVEFIL GRGEHPATSE TGLTSRAKKV IELGIDEARN LGHNYIGTEH LLLGLLREGE
GAAAGVLESF GVTVEKVRTE VGRILNQGLN KPKTSRTTPS RTPQLDQLGF DLTAAARTGK
LDPVIGRAKE IERVVQILSR RTKNNPALIG EPGVGKTSIV EGLAQRIVSG DVPETLEQKH
IISLDVASLV AGTKYRGEFE ERLKKVIEEI KNAGNIILFI DEFHTMVGAG AAEGAVDAAN
ILKPSLARGE VQVIGATTLD DFRKYVERDA ALERRFQPVL VEEPAIEDTL NILRGIKERY
EEHHKLIISE EAIAAAANMA ARYIPDRFLP DKAIDLVDEA ASRVRIKKRT KPVSLKEMKA
IEDSYRRDKE AALATQQYDY ASELRERELQ IAEKIRRMED EWQNEQAMDK PVVGEEDIAQ
VVSMWTGVPL VQLTGDETER LLHMEEALHE RIIGQEEAIV TISKAVRRAR AGLKDPRHPI
GNFVFLGPTG VGKTELARAL AQFMFGSEDA LVRLDMSEFM EKFAVSRLVG APPGYVGYDE
GGQLTEAVRR KSYCLILLDE IEKAHPDVFN ILLQIFDDGH LTDAKGRRVD FRNTIIIMTS
NIGAELIRKG SGTIGFATQT DESKAQQTNF EHMKDKLLGE LKKSFRPEFL NRIDSVVVFH
SLNKEQIRSI VDLMLKSVIK QMSEKGIGLE VTESAKDLLG KKGYDEVYGA RPLRRTIQTM
IEDRLSEDLL RAKFKAGDKV IVDIAEDEII VRLAEPAELS QATS