Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_553 |
Symbol | vhuA |
ID | 8657492 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | + |
Start bp | 523726 |
End bp | 525165 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | |
Product | nickel-dependent hydrogenase, group 3, large subunit |
Protein accession | YP_003330033 |
Protein GI | 270307975 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0139726 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACAGA TTACAATACA GCCGGTTACC AGAATTGAAG GTGCTGCTAA GGTTGTTATA AATCTTGATA ATAGCGGCAA CGTATCTGAT GCCCGCATGC ATATTATAGA GCTGCGCGGT TTTGAAAAAT TTTGTATAGG GCGGCCTGTA GAAGAAATGC CCCGTATTAC CCCGCGTATC TGCGGCGTTT GTCCGCTTTC CCATCATCTG TGTTCCGCTA AGGCTTGTGA CAACGTCTTC GGTGTTACCC CGCCGTCTGC TGGCCGCAAA CTGCGTGAAC TGGCTAATGC CGCTGCTTAT CTGGAAGAGC ACATCCTCCA TTTCTTCTTT TTAGCTGGAG CTGACCTTGT GATGGGTCCG GGTGAAAACT ACTCTATGCG CAATGTTTTT GGTATAGCCC AGAAGATGCC TGAACTGGGC CAGAAGGTTA TACGCTCACG TCATCTGGCA TCAAAGATGC TGGATTATCT TTTGGGAAAA GATATCCACC CTGTAGCGGC TGTAGCCGGA GGGTTCTCAA AACCGCTTAC GGAAACTGAA CGTGAAAAAA TGATGGAAAT GGCTAAAGAA CTGTTGGAGT TCTCCAAGTT TTCCATAGCA TATGCCAAAG AAAATCTTTT CAGTAAATAT GAAAGCCTTA TTAAAGAAAT TGGCGTTATC AAGACCGGCT TTTTAGGCAC TGTAGATAAA AACGGTGCTT TAAACCAATA TGACGGCAAT CTTCGTCTTA TGCGTCCTGA CGGCAAGTTT ACCGAATTTT CCCCCAAGGA TTACCTTGAC CATATTACTG AGCGGGTAGA AGACTGGAGT TATGCCAAAT TCCCGTATGC CAAGGAACTC GGTGAGTTTA ATATGGATTT AGACAATCCC TCCGGTATTT TGAGGGTAAA CACTCTGGCC CGTATAAATG TCTGTGACCG TATTGCTACG CCCTTGGCTC AAAAGGAACT GGAAGAATTC CGCGCTAAAT TCGGCCGTCC TGCCCAGCAG TCACTTCTTT TCAATTGGGC ACGCTTGATA GAGCTTTTAT ACAATGCTGA AAGGGTTATT GAGCTTCTTT CTGACCCCGA AATTACCAGC ACCAACACTC GTGTACCGGT AACTCCCAAA GCCGGCCGGG GAGTGGGTTG CATAGAAGCC CCCCGCGGCA CCCTTATTCA TGACTATACT ACAGATGATA ATGGTTTAGT TACTGATGCC AATCTGGTGG TTGCCACCGT CTTTAATAAT GCTGCTATAA ATATGTCCGT GAAACAAGCT GCCCAAACTC TTATAAAGGG TGGTAAGTAT GATGAAACCA TTTTGGACGA AATAGAAATG GTTATACGGG CTTATGACCC CTGCTTGTCC TGCTCTACCC ACGAGCTTAA CGGCAAAGTA GCGGTCAGGC TGGATATAGT TGACGCAAGC GGACAGCTAG CCCAGACTTA CTCTAACTAA
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Protein sequence | MKQITIQPVT RIEGAAKVVI NLDNSGNVSD ARMHIIELRG FEKFCIGRPV EEMPRITPRI CGVCPLSHHL CSAKACDNVF GVTPPSAGRK LRELANAAAY LEEHILHFFF LAGADLVMGP GENYSMRNVF GIAQKMPELG QKVIRSRHLA SKMLDYLLGK DIHPVAAVAG GFSKPLTETE REKMMEMAKE LLEFSKFSIA YAKENLFSKY ESLIKEIGVI KTGFLGTVDK NGALNQYDGN LRLMRPDGKF TEFSPKDYLD HITERVEDWS YAKFPYAKEL GEFNMDLDNP SGILRVNTLA RINVCDRIAT PLAQKELEEF RAKFGRPAQQ SLLFNWARLI ELLYNAERVI ELLSDPEITS TNTRVPVTPK AGRGVGCIEA PRGTLIHDYT TDDNGLVTDA NLVVATVFNN AAINMSVKQA AQTLIKGGKY DETILDEIEM VIRAYDPCLS CSTHELNGKV AVRLDIVDAS GQLAQTYSN
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