| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_545 |
|---|
| Symbol | ruvB |
|---|
| ID | 8657484 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. VS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013552 |
|---|
| Strand | + |
|---|
| Start bp | 517267 |
|---|
| End bp | 518316 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | Holliday junction DNA helicase subunit |
|---|
| Protein accession | YP_003330025 |
|---|
| Protein GI | 270307967 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGAGG AAAAAGAACG GCTCATTTCC GGGAAACTGG CTGCCGATGA TGCCAAGCTG
GATACCAGCC TTCGCCCCCG TTGCCTGCCT GATTTTATTG GTCAAAAACG CCTCAAGGAT
AATCTTGGGG TAGCCATACA GGCGGCAAAG CAAAGGGGAG AGGCGCTGGA CCATGTTTTG
CTTTACGGGC CGCCGGGATT AGGGAAAACC ACTCTTTCGC ATATCATAGC TTTGGAGATG
GGGGTGAATA TCCGTATTAC CTCCGGCCCG GCCATTGAAA GGCAGGGTGA CCTGGCAGCT
ATTCTGACCA ATCTGAAGCC CTTTGATATC CTGTTTATAG ATGAAATTCA CCGCCTTAGC
CGGAATGTAG AGGAAGTCCT TTATCCGGCT ATGGAAGACT ACGCACTTGA CATAATGGTA
GGAAAAGGGC CGGGCGCCAG AAGCCTCAGG CTTAAACTGC CACATTTCAC CCTGATAGGG
GCGACCACCC GCTATGCCAT GCTTTCAGCA CCTTTGCGTG ATCGTTTCGG TTCTATATTC
CGTCTGGATT TTTATGATGA AGAAGCCATA TATGATATTG TCCGCCGCTC CGCCCGTATA
CTGGGGGTGG AAGCAGATGA AAATGGTCTT CACCAGATAG CCTGCCGTTC CCGCGGCACT
CCCAGAGTGG CAAACCGTTT GCTTCGGCGG GTGAGGGACT ATGCCCAGGT AAAGGGAAAC
GGGCTGATTA CCGGGGATAT TGCAGCGGAA TCTCTGGCCT GTTTGGAAGT GGACAAATTG
GGGCTGGATG AGATTGATCA CAAGGTTTTA AAAACCATTA TCCATAAATT CGGGGGAGGG
CCGGTGGGTC TTGAAACTAT TGCCGCGGCT ATTTCCGAAG AAGCGGATAC GATTATGGAC
GTTTATGAAC CTTATCTGCT CCAACTGGGT TTTCTGGAAA GAACACCTAG AGGACGTCAG
GCAACCCGTT TGGCTTACCA GCACTTGAGT ATACCTTATC CGGCTGATAA AAATACCCAG
CAGGGACTTT GGACGGAGAA TGGCACCTAA
|
|---|
| Protein sequence | MSEEKERLIS GKLAADDAKL DTSLRPRCLP DFIGQKRLKD NLGVAIQAAK QRGEALDHVL
LYGPPGLGKT TLSHIIALEM GVNIRITSGP AIERQGDLAA ILTNLKPFDI LFIDEIHRLS
RNVEEVLYPA MEDYALDIMV GKGPGARSLR LKLPHFTLIG ATTRYAMLSA PLRDRFGSIF
RLDFYDEEAI YDIVRRSARI LGVEADENGL HQIACRSRGT PRVANRLLRR VRDYAQVKGN
GLITGDIAAE SLACLEVDKL GLDEIDHKVL KTIIHKFGGG PVGLETIAAA ISEEADTIMD
VYEPYLLQLG FLERTPRGRQ ATRLAYQHLS IPYPADKNTQ QGLWTENGT
|
|---|
| |