Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_542 |
Symbol | ribF |
ID | 8657481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 508079 |
End bp | 508996 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | FAD synthase |
Protein accession | YP_003330022 |
Protein GI | 270307964 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0794866 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACTCC TTGAAGAAGA AATTATCCGC CATTCCTCAG ACCAAGATAC CCTTGTTACC ATAGGCATTT TTGACGGTGT CCACCTGGGG CATCAGCACC TTATAAATGA GCTTAAAAAA CAGGCCAAAG AACGTAATCT GCAAAGCTGC CTTATCACCT TTAAAGACCA CCCCAGCAAA GTGCTTGGAC AGGATGATAT TAAACTGATA CTAAGTTTGG AAGAACGCAA TCTGGCGCTT TCACAAATGG GGCTTGACCA GATAATAATG CTCTCTTTCA CCCCTGAAAT CTCCACTGTC TCCGCCACCG ACTTTGTAGG CTATCTGCTG GACCACCTGC ACATGAAAGG CATTGTAGTA GGTTCGGATT TTGCTTTGGG CAAAAACAGG GCCGGAGATG CCACCGCCCT TAGGCGGCTT AGCCATATTA TGGACTTCAG CGTTTCGGTA GTATCACCGG TAGTTATAGA AAACCAGATA GTCAGCTCTA CCGCTATCCG CCGGGCACTG CTTTCCGGCA ATGTCAGCAA AGCTCGCCTG ATGCTGGGAA GAAACTATCA TCTCCGCGGG ACTGTTCAAA ACGGGGCAAA CCGGGGTACG AAGCTGGGCT TCCCCACCGC CAACCTTACC CTGCCCGGTT ATCTGGCCTT GCCGGCAGAC GGTGTTTATG CCGCCAAAGC ATTTTTAGGC GAAAAAGAGT ATAACGCGGT AGCAAATATA GGCTCATGCC CCACCTTCGG GCAGGAGGAA CACCGCCTTG AAGTCCACCT GCTGGATTTT GCAGGTGATA TAAGGGGTCA AGTACTTAAG GTGGAATTTG TAGAATTTTT ACGGCCTGAA ATCTGCTTCG CAGATGCCGA AGCCCTGAAA ACCCAGATTT CAGCTGATAT ATCAAAAGCC AGAGATATAC TGAGGTAA
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Protein sequence | MTLLEEEIIR HSSDQDTLVT IGIFDGVHLG HQHLINELKK QAKERNLQSC LITFKDHPSK VLGQDDIKLI LSLEERNLAL SQMGLDQIIM LSFTPEISTV SATDFVGYLL DHLHMKGIVV GSDFALGKNR AGDATALRRL SHIMDFSVSV VSPVVIENQI VSSTAIRRAL LSGNVSKARL MLGRNYHLRG TVQNGANRGT KLGFPTANLT LPGYLALPAD GVYAAKAFLG EKEYNAVANI GSCPTFGQEE HRLEVHLLDF AGDIRGQVLK VEFVEFLRPE ICFADAEALK TQISADISKA RDILR
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