Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_539 |
Symbol | serA |
ID | 8657478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 504152 |
End bp | 505732 |
Gene Length | 1581 bp |
Protein Length | 526 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | phosphoglycerate dehydrogenase |
Protein accession | YP_003330019 |
Protein GI | 270307961 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.366241 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAG TACTGGTAAG CGATGCACTC TCCGCAACCG GGTTATCACC CCTTAAGGAG ATTGCACAGG TAGATGTAAA GACCGGCCTT AAACCGGAGG AGTTGGTAAG CATTGTCGGT GAATATGACG CCCTGCTGGT ACGCAGCCAG ACCCAGGTCA CCGCTGATAT TATCAATGCC GGTAAAAAAC TGCAGGTTAT CGGCCGGGCC GGAGTGGGCG TAGATAATAT TGACTTAAAA GCTGCCACCG GTAACGGTAT TATCGTGGTA AATGCCCCCA CCGGCAACAC TATCTCCGCT ACCGAACATA CCCTGGCCCT TATGCTGTCT ATGGCCCGCC ATATTCCCAG AGCCAACGCT AGCCTGAAAT CCGGTCAGTG GAAACGCAAT GAATTTGTAG GCTCTGAACT TAAGGGCAAA ACTCTGGGCA TTGTAGGTTT GGGCAATATC GGCTCTGAGA TAGCCAAAAG GGCTTTAGCT TTGGAAATGC GGGTTATAGG TTATGACCCC TTTATATCTA TGGAACGTGC CAAAAAACTG CAGGCAGAAC TGGTACCCTT TGAAGACCTG CTGAAACAGG CTGACTTTAT CACCCTGCAT GTTCCCATGA CCGGCCAGAC CAAGGGACTT ATCGGCCCCA AGGAACTGGA GATGATGAAA CCCACCGTCC GCCTTATCAA TACCTCCCGC GGCGGCATCA TAGACGAAGA AGCACTGGCA ACAGCCATCA AAGAAAAGCG TATCGGCGGT GCCGCTATTG ACGTTTTCTC GAAAGAACCC TGCACCGAAA GCTGCCTTTT TGAGTGTGAC AATATTATTG TTACCCCCCA CCTGGGTGCT TCCACTGCCG AAGCCCAGGA GCTGGCTACC TCTGACGTAG TCAAACAGGT AATAGATGTA TTTGAAGGCC GCCCTGCCCG CTACGCCGTA AATGCACCCT ATATCTCGGC CGAAAGCCTG CCGGTAGTTG GTCCTTTCAT GCCGGTTGCC CGCACAGTGG GCAGCCTGGT AAGCCAGCTG ACTGACGGGC ACATGAAAAA TGTGACCATT AAATACTGCG GCGAACTGGC CGCATATGAT ACCACTGCCC TGAAGGCTCT GGTGCTAGGC GGTATACTTG AGCATATCAG CGAAGAACGG GTGAACGTGG TCAATGCTGA TATCGTAGCC TCGCAGCGCG GGCTGGGTGT AACCGAACAA AAGGAATCAG CCTGCCAGAA TTTTTCCAGC CTGATTACCG TCACCATAGA TACCGATAAC GGCAAATCCA ATACGGTTGC CGGCAGTCTG GTACGCGGTG ATGTACACAT TGTGAAATTG AATGATTACT GGATAGACAT TGTACCTACC GGCGGTTATT TCCTGTTTGC AGACCATATA GACCGCCCCG GACTGATAGG TGCGGCCGGC AAGATTACCG GGGATGCAGA TATCAACATA AGCTATATGC ACCTCAGCCG CCAGAAAGCC AGAGGGCAGG CCCTAATGAT ACTGGCTCTG GATGAGCCCC TGCCGGAAAA ACAGCGCCAG CAGCTGCTGT CTCTGCAGGA CGTTCAAACT GTCCAAGTTG TAAAAATCTA G
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Protein sequence | MKKVLVSDAL SATGLSPLKE IAQVDVKTGL KPEELVSIVG EYDALLVRSQ TQVTADIINA GKKLQVIGRA GVGVDNIDLK AATGNGIIVV NAPTGNTISA TEHTLALMLS MARHIPRANA SLKSGQWKRN EFVGSELKGK TLGIVGLGNI GSEIAKRALA LEMRVIGYDP FISMERAKKL QAELVPFEDL LKQADFITLH VPMTGQTKGL IGPKELEMMK PTVRLINTSR GGIIDEEALA TAIKEKRIGG AAIDVFSKEP CTESCLFECD NIIVTPHLGA STAEAQELAT SDVVKQVIDV FEGRPARYAV NAPYISAESL PVVGPFMPVA RTVGSLVSQL TDGHMKNVTI KYCGELAAYD TTALKALVLG GILEHISEER VNVVNADIVA SQRGLGVTEQ KESACQNFSS LITVTIDTDN GKSNTVAGSL VRGDVHIVKL NDYWIDIVPT GGYFLFADHI DRPGLIGAAG KITGDADINI SYMHLSRQKA RGQALMILAL DEPLPEKQRQ QLLSLQDVQT VQVVKI
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