| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_503 |
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| Symbol | atpD |
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| ID | 8657443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. VS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013552 |
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| Strand | + |
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| Start bp | 473023 |
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| End bp | 474417 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | |
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| Product | ATP synthase F1, beta subunit |
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| Protein accession | YP_003329985 |
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| Protein GI | 270307927 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0039983 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAACG GAAAGGTTAT ACAGGTAATT GGTTCGGTTG TTGACGTAGA GTTTTCGGCA
GATTCCATGC CGGCTCTGTT TAATGCGTTG GAAATTCCCC GTGATAATGG CAAAATGGTG
CTGGAAGTGC AGTCACACGT CGGTAACAAC CGCGTAAAGT GCCTTTCCTT TACTCCTACC
GATGGTCTGG AGCGCGGCGC CGAGGTTATT GATACCAAAA GACCGCTTTC GGTTCCGGTA
GGCCGTAATA CTTTGGGGCG TATTTTTAAC GTGCTCGGTG AACCTCTGGA TAACAGGGGT
GATGTAAAAT CTGAAAAGAC TATGCCTATT CACCGCTCGG CTCCCGCTAT GGACGAGCTG
GAATCTTCCG CTCAGGTATT GGAAACGGGT CTTAAAGTTA TTGACCTGAT TGCACCCTTT
GCCCGTGGCG GTAAGATCGG CGCTTTAGGT GGTGCAGGTG TAGGCAAGAC CGTTCTTATT
CAGGAACTTA TACGTAACAT TGCTACCGAG CACGAAGGTT TTTCAGTTTT TGCCGGTGTA
GGTGAACGTT CCCGCGAAGG TAATGACCTT TGGCATGAAA TGGAAGACTC AGGCGTGCTT
CCCAAGACTA CCATGGTATT CGGTCAGATG AATGAGCTTC CCGCTGTACG TCTGCGTATT
GCTCTTACCG GTCTTACCAT GGCCGAATAT TTCCGTGATG AAGAAAGACA GGACGTGCTT
CTGTTTATTG ACAATATCTA TCGTTATACC CTGGCTGGTA TGGAAGTATC CGCCCTTTTA
GGACGTATGC CTTCCGCTGT AGGTTATCAG CCCACTCTGG CCACTGAAAT GGGTGCTCTG
CAGGAGCGCA TTGCTTCTAC CAAACAGGGT TCAATCACCT CATTCCAGGC TGTGTACGTA
CCGGCAGATG ACTATACCGA TCCCGGTGTA GTCGCCACTT TCGGTCATCT GGATGCTATG
ATTGCCCTTG AGCGTTCACT GGCCGAACAG GCTCTTTATC CGGCTGTAGA TCCGTTGGCA
TCCAATTCCC GCATACTTGA TCCTCAGGTA GTGGGTGAGG AACATTATAA AGTAGCCCGT
GACGTTCAAA AGGTTCTTCA GCGCTATAAG GACCTTCAGG ATGTTATCGC TATCCTGGGC
ATGGAAGAAC TTTCTGAAGA AGACAAACTG ACTGTTGCCC GTGCCCGCCG AATTCAGCGT
TTCCTGACTC AACCTATGTT TGTTTCAGAG GTATTTACTG GTCGTCCCGG TCAGTATGTA
TCTTTGGCTG AAACTATTCG CGGGTTTAAG GAAATTCTTG AGGGTAAGCA TGATAGTTTG
CCTGAACAGG CTTTCTATAT GGTAGGCACT ATTGATGATG CCGTGGCCGA AGCCAAAAAG
CTAAGCGCGG TCTAA
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| Protein sequence | MANGKVIQVI GSVVDVEFSA DSMPALFNAL EIPRDNGKMV LEVQSHVGNN RVKCLSFTPT
DGLERGAEVI DTKRPLSVPV GRNTLGRIFN VLGEPLDNRG DVKSEKTMPI HRSAPAMDEL
ESSAQVLETG LKVIDLIAPF ARGGKIGALG GAGVGKTVLI QELIRNIATE HEGFSVFAGV
GERSREGNDL WHEMEDSGVL PKTTMVFGQM NELPAVRLRI ALTGLTMAEY FRDEERQDVL
LFIDNIYRYT LAGMEVSALL GRMPSAVGYQ PTLATEMGAL QERIASTKQG SITSFQAVYV
PADDYTDPGV VATFGHLDAM IALERSLAEQ ALYPAVDPLA SNSRILDPQV VGEEHYKVAR
DVQKVLQRYK DLQDVIAILG MEELSEEDKL TVARARRIQR FLTQPMFVSE VFTGRPGQYV
SLAETIRGFK EILEGKHDSL PEQAFYMVGT IDDAVAEAKK LSAV
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