Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_490 |
Symbol | sbcC |
ID | 8657430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 457715 |
End bp | 460294 |
Gene Length | 2580 bp |
Protein Length | 859 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | DNA repair ATPase |
Protein accession | YP_003329972 |
Protein GI | 270307914 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000109294 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTCCTG TCAAACTCAA AATAAAAAAC TTCATGTGCT ACCGCGGCGA AATTCCGCCT TTTTCTTTTA ATGGGGTGCA TACCGCCTGC ATCTGCGGCC AAAACGGGGC AGGTAAATCC GCCCTGATAG ATGCCATTAC CTGGGCGCTT TGGGGAAAAA GCCGCGCCAA AAGTGATGAT GATGTAGTGT CTCTAAACGA ACAGGAAACT GAAGTCAGCC TAGATTTTGA GATTTCGGGT GAACTTTATC AGGTTATCCG CCAACGCCAA CGCCCCAAAA AGACCGGAGC AAACGGGCAA AGCCTTTTAA GCTTGTTTGC CATAAAGGAT GGGAAACCCC TGAATATCAC CGGGGATACC CTGACCCAAA CAGAGAAAAA GATAATTTCC ATACTGCATA TGGACTATGA CACCTTTATA AACAGTGCTT TTCTGCGGCA GGGGCATGCC AACCAGTTTA CCCAGCAGCC CCCCGGCAAA CGCAAGGAAG TACTCTCCAA CATACTGGGG TTAGAAATAT ATGACCAGCT GGAAGACCTG GCCAGACAGG CCGTACGCGA GGCAGAGGCT AAAAAACTGC TTATAGAGCG GAGTATTGCA GACGGCCAAG AAGGGTTGAA ATCCAGACCG GAACTGGCAA AAGATTTAGA ACTTACCCGC CTAGACCTGA CAGACGGTGA GGAGAAACTG AAAACCCATA TTGCCAAGCT GGAAATCCTC AGGCATAAAA AACATGCCTT TGATGCCAAA CAAAGTGCCT GCCTCCAGAT AGAAAAAGAC CTGCGGGACA TATCAAAAGA CCAATCCCTT TGGCTTCAAA ACCAGCAGGA AATAAAAGAG CGTATCAGCA CCTTTGAAAC ACTCATCGTT CAGGAAGCAG ATATTCTCAA AGGCTATAAG GAATACTCAG ACTGCCAAAG CCTGTATGAA AAACACAACC GAATACTGGC AAAATTAAGG CAGATGGAAA AAGAAAAAAA ACCGCTTGAA GATGCCGTTT ATAAAGAAGA AAACAGCCTG AAAAACACCC TGACTAAATA TCAGGAACAC CTCAAAATGC GGCAGGAAAC CGCCCAGACT TTGGACAAAC TGGAACAAGA AAAAATACAG TCAGACCAAC TGCACCTGGA GCTGGAAAAT GAAGAGTCTG CCTTAAAAGC CCGGCAAACC AAGCTGGCAG ATATGCAAGG AAGTTTAGCC GGACTGGAGA CCGAGTATGC TGGTACAGCC AGAGAAATAA ACTCTCTGGA AGAAAAACTA AAACTGCTTA CCGAAGCAGG TGAAAGCCGC TGCAACTGCC CCCTGTGCGA AACCAAGCTG GGGCAAGACA AACTCAAACT GGTATTCGGC AAATACCGGA CAGAACAGGA TACTAAGGAA AAACAGCAAA GCAGCCTGAA AATAAAGCTT GAGCAGCTAA GGCTGGATAT ACAGACCCTA ACTGCCCAAA TTGAAACTGA AACCAAACGC TTAAACCAAA AACGCAGGCA GTATGAGGGA CAGCTGAGCG TATTGGAAAA AGGGATTGCA GACGCCAAAG ATGCCAGAAC CAAAGCGGCA AAAGGCAGAG AGCTGATTTC TGATATTGAG AAGCAGCTGA ACGAACGCAG TTATGCCGTT TCCGAGCAAG CCAGGCTGGC AGTAATTGAA AAAGAGATAC TGGAACTGAA TTTTGATAAT GCCGAATACA CCCAAAACCA GCAAACTTTG GCCGGCCTGA CCTATTTTGA GGAACAAAAA CGCAAACTGA ACGAGGCACA AAGCCGCCTG CCTCTTGAAA AGGATAGACT GGAAAACACG GCTTCGGCAC TGGTAGAACT CACCTTCCGC CATGATACTA AACTGAGTGA ACAGCAAACC CTGCAAAAAG AACTGGCTGA ACTGCCCGAA CTGGAGCAGG AGCTGGAAAC CGCCGAAGCC GGATACAAGT TACTCAGCCA AACGCAAGAT AATCTGAGGC AACAACTGGG TTCGCTCAGC CAGAAAGAAG AGCAGCTGAA CGAACTTGAA AAGAAGCTGA AAAAACAGGA GCAGGATAAA GAGCAAACCG CCAAAGAAAT ATACTACTTT GGTAAACTGG CCAGAGCTTT CGGCAAGAAA GACGGCATCC AGACAATGCT CATTGAAGAC ACCCTGCCCG AACTGGAAAG CGGGGCAGAC CTGCTGCTGT CACGGATGAC TGACGGGCGT ATGCACCTTA GTATAGAAAC CCAGCGCTCA ACCAAAAAGG GTGACCAGAC CGAGACTCTG GATATAAATA TCTCGGATGA GCTTGGCACC CGCAACTACG AAACATTCAG CGGGGGTGAG GCTTTCAGGA TAGATTTTGC GGTCAGGATT GCCCTGTCAC GCCTGCTGGC AAACCGTCTG GGCGCACCTT TGCGGACGCT GATTATTGAT GAAGGGTTCG GCACACAGGA CTCGACCGGT ATTGAACGCC TGAAAGAGGC TATAAACTCC ATTCAGGATG AGTTTGACAA GATACTGGTC ATAACCCATA TAGATGACCT GAAAGATTCT TTCCCCACCC GCATTGAGAT AGATAAAACC CCGTCAGGCT CAGCTATACG CTTAAACTAA
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Protein sequence | MIPVKLKIKN FMCYRGEIPP FSFNGVHTAC ICGQNGAGKS ALIDAITWAL WGKSRAKSDD DVVSLNEQET EVSLDFEISG ELYQVIRQRQ RPKKTGANGQ SLLSLFAIKD GKPLNITGDT LTQTEKKIIS ILHMDYDTFI NSAFLRQGHA NQFTQQPPGK RKEVLSNILG LEIYDQLEDL ARQAVREAEA KKLLIERSIA DGQEGLKSRP ELAKDLELTR LDLTDGEEKL KTHIAKLEIL RHKKHAFDAK QSACLQIEKD LRDISKDQSL WLQNQQEIKE RISTFETLIV QEADILKGYK EYSDCQSLYE KHNRILAKLR QMEKEKKPLE DAVYKEENSL KNTLTKYQEH LKMRQETAQT LDKLEQEKIQ SDQLHLELEN EESALKARQT KLADMQGSLA GLETEYAGTA REINSLEEKL KLLTEAGESR CNCPLCETKL GQDKLKLVFG KYRTEQDTKE KQQSSLKIKL EQLRLDIQTL TAQIETETKR LNQKRRQYEG QLSVLEKGIA DAKDARTKAA KGRELISDIE KQLNERSYAV SEQARLAVIE KEILELNFDN AEYTQNQQTL AGLTYFEEQK RKLNEAQSRL PLEKDRLENT ASALVELTFR HDTKLSEQQT LQKELAELPE LEQELETAEA GYKLLSQTQD NLRQQLGSLS QKEEQLNELE KKLKKQEQDK EQTAKEIYYF GKLARAFGKK DGIQTMLIED TLPELESGAD LLLSRMTDGR MHLSIETQRS TKKGDQTETL DINISDELGT RNYETFSGGE AFRIDFAVRI ALSRLLANRL GAPLRTLIID EGFGTQDSTG IERLKEAINS IQDEFDKILV ITHIDDLKDS FPTRIEIDKT PSGSAIRLN
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