| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_483 |
|---|
| Symbol | trxB |
|---|
| ID | 8657423 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. VS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013552 |
|---|
| Strand | - |
|---|
| Start bp | 449672 |
|---|
| End bp | 450592 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | thioredoxin reductase |
|---|
| Protein accession | YP_003329965 |
|---|
| Protein GI | 270307907 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAACAC CCCTGTATGA TGTAATAATT ATAGGCGGAG GCCCGGCCGG GCTGACTGCC
GCTCTGTATA CCGGCAGGGC AAAACTTAAG ACACTGGTTA TTGAACGCGC ATTTATTGGC
GGGCAGATAA CCCGTTCGGA AAAAGTGGAT AACTACCCCG GCTTCCCGGA GGGTATCACC
GGTTTTGACC TGACCCAACA AATGCAAATA CAAGCCGAAA AATACGGGGC GGAGATAACT
TCGGCAGAGG TAACTGCCCT TAATAAAGCC AAAGACAGCT TTGAAATTAG CACCGAAGCT
GGCAAACTAA GCGGGCGTTG TATTATTATC TGCGGCGGAA CCGAACGCAA CAAGCTGGGC
GTTCCCGGTG AAGAGGAGTT TTCAGGACGG GGTGTTTCCT ACTGCGCCAC CTGTGATGCC
CCTTTTTACA ATGACAAGGT TGTTGCAGCA GTAGGCGGGG GAAACATGGC AATTTACGAA
GCCCTGCACC TGTCCGAGTT TGCAAAAAAA GTTTACCTGA TTCACCGCCG GCAGGGTTTC
CGGGCAGATG CGGTATTAAT AGATAAAGCA AAAAGCAAGG GCAATATTGA AATGGCGCTG
GATACGGTAA TTACCGCCAT AAACGGCAAG GACAGCATCC AGTCACTATC ATTAAATAAC
CTTAAAACCC AAAAAACATC TGACCTGCCG GTAAACGGGC TTTTTGTAGC CGTTGGCTTA
CAACCGAATA CCGCTTATCT GAAGGGTGTG GTGGATATGG ACAAAAACGG CAGCATACTG
GTAAATGACC AGATGGAAAC GTCAGTAAGC GGCATACTCT GTGCCGGGGA TATCCGAAGC
GGCTCAATAA GACAGGTTAT ATCCGCCGCC GGAGACGGGG CAGTTGCCGC CCTTTCCGCC
AAACGCTATC TTGACCGCTA A
|
|---|
| Protein sequence | MSTPLYDVII IGGGPAGLTA ALYTGRAKLK TLVIERAFIG GQITRSEKVD NYPGFPEGIT
GFDLTQQMQI QAEKYGAEIT SAEVTALNKA KDSFEISTEA GKLSGRCIII CGGTERNKLG
VPGEEEFSGR GVSYCATCDA PFYNDKVVAA VGGGNMAIYE ALHLSEFAKK VYLIHRRQGF
RADAVLIDKA KSKGNIEMAL DTVITAINGK DSIQSLSLNN LKTQKTSDLP VNGLFVAVGL
QPNTAYLKGV VDMDKNGSIL VNDQMETSVS GILCAGDIRS GSIRQVISAA GDGAVAALSA
KRYLDR
|
|---|
| |