Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_48 |
Symbol | |
ID | 8657002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | + |
Start bp | 39466 |
End bp | 40104 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003329552 |
Protein GI | 270307494 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00550063 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTAACA AGCCAAGACC AAACCCCTAT TGGCGGTGTA TCAGTTTAAA ATCAAAAACC TGCATATCCA AGCGTAAACA AACAGTCTTT ATGCCGTTAC AGCAGAACGG CAAATGGTAT TTAAGGCGGG TTTGGGATAT AATCAGGTCA ATGTCAGATA ACAATCTTGC CAATATCAAA AGTGCTGTTA TAAAAATGAT TGACACTGAA AAGGGCAGTT TGGAAGAGCT GTCTCTTAAG CTGCATGCCA ACCCTGAGTT GGGCTATCAG GAATATAAAG CTGTAGAATG GTTGTGCGAA TACCTGTCCA GACACAATTT CAGTATTGAA AGAAATACCG GCGGCCTCAA GACTGCCTTC AAAGCCACTT TCGGTCAGGG TAAACCGGTT ATAGGTTTTC TGGCTGAGTA CGACGCCCTG CCCCAGCTGG GTCATGCCTG CGGCCATAAC CTTATTGCCA CCGCGGCAGC GGGTGCGGCT GTAGCCGCCC GTCTGGCCGC CAAACTTTAC GGCGGTACGG TCTGTCTTAT CGGCACTCCG GCTGAAGAGC TTAGCGGCGG TAAAATACAG ATGGTGGAAA AAGGTGTATT TAAAGAACTG GAGGCGGCGC TTATAGCCCA CCCCGGCAAT GATGATATTG CTACCACCCA GGCACTGGCC TGTGTAACAT TAAACGTAGA GTATTTCGGT AAAGAATCCC ATGCCGCCGC CCACCCGGAC AAAGGCATAA ACGCACTTGA CGCCATAGTG CTGGCCTATA CCAGCCTCAA TTCCCTCCGC CAGCACATAG AGCCGGGTGC CCGTATTCAC GGCATTATTA CCGACGGGGG CAAAGCCGCC AACATTGTAC CCGGGCATTC CGCCGGCACT TTCCTGATAC GTTCCCAAAC TCTGCCCTAC CTAAGAGAGC TGATGGACAG GGTACTGGAC TGTTTTAAAT CTGCCGCCCA GGCTACCGGT GCCCGTTTGG AGTACCGCTT TGATAAATCC ATATATGCCC CCATGAATAA CAACATGGCT CTGGCAAACC TATATGTAAC AAACATGGAT ATGCTGGGCC GCAAGACTTT ACTTGAAGAC CCTGAGATGA ATTTTGGAAG TACCGACATG GGCAACGTCA GTCAAATTGT ACCCAGCCTG CATGGGTATT ACTCCATTAC CCGTAAAGAA GTTTCCGGCC ATACCGAAGA ATTTGCTTCT GCCGCCTGTT CGTCAAATGG TATTAAGGGT GCTTTAGATG CCGCCAAGGC TATGGCTATG ACCGCAGCTG ACTTACTCGG GAACCCAGCC AATCTGGATA AAGTACGAAC AGAATTTCAA AAATCTACCC GGCCATCCGC CTGA
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Protein sequence | MPNFAGENSL EEKRKQSLKE QLKAVNWGSL LLTFGALIAL SFLLAWGLNS LVDSLEIPLD EYAWLTYLLV FVMSILANAT VIAPVPFAIS IMVAAATNFN PVMVALFGAL GGSLGEMSGY FAGRLGKKLA IPEGLVGYSR VESWIQKYGA WAIAFLAAQP VVPFDVGGLI AGLARMPVHK FLPALFLGKF PKYIVMVYAG IGLIDWLPFL KS
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