| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_475 |
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| Symbol | lysA |
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| ID | 8657415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. VS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013552 |
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| Strand | + |
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| Start bp | 441963 |
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| End bp | 443267 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_003329957 |
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| Protein GI | 270307899 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACCAA GAATACAAGT ATTCCCCAAA AACACTGAAG TAAAAAATAA TCATCTGGTT
ATTGGCGGAG CGGATGTTAC CGGGCTTTGT GCCAAGCATG GCACGCCGCT TTATATCTTT
GACGAGTCTA CTATCCGCCA GAATTGCCGA GATTTCAAGC GGGAATTTTC ACGCCGCTAT
GCTGACAGTT CTGTCAGTTA CGCTTCGAAA GCCTTTTTAC ATCCGGCTTT ATTGAAAATA
TTGGCCGAAG AAGGTATGAG TCTGGATGTG GTTTCAGGCG GAGAGCTTTC CATAGCCAAT
AATGCCGGTT TCCCTATGGA TATGGTTTAT TTCCACGGAA ATAACAAATC TGCCGAGGAA
CTTCGGCTGG CACTCCGGCT GCATGTAGGG CGGATTGTAG TAGATAGTTT TGATGAAATC
AAATTGCTTT CAAAATTGGC GGATGAAAGC GGGCACATAC CGGATATACT CCTCAGGCTT
ACCCCCGGAG TTGATGCCCA CACTCACCAC CATATTACTA CCGGCAAGCT GGATTCGAAG
TTTGGTTTTC CGCTGTTCCA GGCAGCTGAG GCGGTAGGTC TGGCTATGGC CCAGGCCAGC
TTAAATCTGG TAGGGTTTCA TTTCCATATC GGTTCCCAGA TATTTGAAAC TCAGCCCTTC
CTTGATGCCA TAGATTTGGT ATTGGATTTT GCCGCTCAGG TTCAGGAACG TTATGGCTTT
GACATAGAAG AACTGGATAT CGGCGGCGGC TATGGTGTTC AGTACGAAAT AGACAAGCCT
GCACCTGCGG TATCGGTTTA TGCAGAGGCT ATCGGTGCTA AGATTGTAGC TAAATGTCAT
AGTTTGAAAC TGGCCCCTCC AAGCCTGAAT ATTGAACCGG GACGGGCTAT CATCGCTCAG
GCAGGGGTTG CATTGTATAC GGTAGGGGTT ATCAAAGATA TCCCCGGCAT TCGTCAGTAT
GCCTCGGTGG ATGGGGGTAT GGGGGATAAT ATCCGCCCGG CTTTATATGA GGCAAAGTAC
GAAGCTGTGG TGGCAAGCAA TGTACAATCT GCTGAAAAAC AGAAAGTAAC TATAGCCGGT
AAGTTTTGTG AATCCGGTGA TATACTTATA ACAGATATAG AATTACCTTC CCTGAGAGCA
GGTGACATAC TGGCAGTTCC CTGCTGCGGG GCTTACTGTT TGCCTATGTC CAGCAACTAC
AACGGCTATC AGCGCCCGGC GGTAGTAATA CTGAAAAATG GTGAAGACCG CCTGATACGG
CGGCGTGAAA CTGTGGAAGA CCTTAGCCGT TTGGATTCGG TCTAA
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| Protein sequence | MEPRIQVFPK NTEVKNNHLV IGGADVTGLC AKHGTPLYIF DESTIRQNCR DFKREFSRRY
ADSSVSYASK AFLHPALLKI LAEEGMSLDV VSGGELSIAN NAGFPMDMVY FHGNNKSAEE
LRLALRLHVG RIVVDSFDEI KLLSKLADES GHIPDILLRL TPGVDAHTHH HITTGKLDSK
FGFPLFQAAE AVGLAMAQAS LNLVGFHFHI GSQIFETQPF LDAIDLVLDF AAQVQERYGF
DIEELDIGGG YGVQYEIDKP APAVSVYAEA IGAKIVAKCH SLKLAPPSLN IEPGRAIIAQ
AGVALYTVGV IKDIPGIRQY ASVDGGMGDN IRPALYEAKY EAVVASNVQS AEKQKVTIAG
KFCESGDILI TDIELPSLRA GDILAVPCCG AYCLPMSSNY NGYQRPAVVI LKNGEDRLIR
RRETVEDLSR LDSV
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