Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_471 |
Symbol | |
ID | 8657411 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | + |
Start bp | 437687 |
End bp | 438868 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | nucleoside-diphosphate-sugar pyrophosphorylase |
Protein accession | YP_003329953 |
Protein GI | 270307895 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACAAG CAGTTATACT GGCAGCCGGT GAGGGACAAC GCCTGCGGCC TTTTACCGCA AGTAAGTCAA AAGTGATGCT GTCTATTGCG GGCAAACCCC TGCTTGAGTA TGTTATTGAA TCCCTTGCCC TAAATGGTAT CCGGGATATT ATTCTGGTAG TAGGTTACCA GCGTGAGCGT ATATTTGATT ATTTTGGTCA GGGCGGGCAT CTGGGGGTGC AGATAACCTA TGTTCACCAA CCAAATCAGT TGGGCACAGC CCATGCTCTT AAACAGGCAA ATGATAAAAT CAAAGGGGAT TTTCTGGTTC TGAACGGAGA CCAGCTTATC AAGCCTTCTA CCATAAGTGA GTTTACAAAA CAACCGCCGC AGGCGGTTAT GGTAAAAGCC GTAAACGACG AAGACCCCAG ACGATACGGG GTTATAACTT CTTCGGGTGG CTTGTTAACT TCCATAGAGG AAAAACCCAG TATAGCCAAA AGCAGTTTTA TAAATACCGG CATTTACTCT TTCTCAATGA AAGTTTTTGA TTATATCGGC GAGCATCTGG ATATTCCGGT GGTTTTGCAG TCCATGATAA AAGACAAGTT GGATATACAG GTAGCAGAAA GCCATGGACT TTGGCTGGAT ATAGTCTACC CGTGGGATAT GCTTTCACTT AATGCGGCAG TATCGGCCGA GCTTAAGCCG GGGGTGGCCG GCACTATTGA AAGCGGTGTG GTAATAAAAG GGCCGGTATT GATTGGCAAA AATACGGTTA TCCGTTCAAA TTCATATATT ACCGGTCCGG TTATAATAGG TGAGGGGTGT GATATTGGCC CGAGTGTTTG TATTTACCCT TCCTCCAGCA TTGCAGATAA TGTAACGGTA GCCCCTTTCT GCCAGATAAA AAACAGCCTT ATTTACAGCG GCAACAGTAT CGGGGTAGCT TCGGTTATTG AAGATTCGGT GATAGACCGC GGCTGCGTGC TTCGCGGCCA GTTCAATGCC CCTTCCTCCG AGGTAGAGAC CCGCATAAAT GATGAATTGC ATAAAATAAA AGTCGGCACC ATGATGGGTG AAGGCTGTAT CGTGGGTAAC TCTGTCGTGT CGCAAAGCGG TACGGTGGTG GGCAATTCCA GCCGCATAGC CCCTTTAAAA ACGCTTTCGG GCAGTATACC TGACGGCAGT TTGGTGGTAT AG
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Protein sequence | MKQAVILAAG EGQRLRPFTA SKSKVMLSIA GKPLLEYVIE SLALNGIRDI ILVVGYQRER IFDYFGQGGH LGVQITYVHQ PNQLGTAHAL KQANDKIKGD FLVLNGDQLI KPSTISEFTK QPPQAVMVKA VNDEDPRRYG VITSSGGLLT SIEEKPSIAK SSFINTGIYS FSMKVFDYIG EHLDIPVVLQ SMIKDKLDIQ VAESHGLWLD IVYPWDMLSL NAAVSAELKP GVAGTIESGV VIKGPVLIGK NTVIRSNSYI TGPVIIGEGC DIGPSVCIYP SSSIADNVTV APFCQIKNSL IYSGNSIGVA SVIEDSVIDR GCVLRGQFNA PSSEVETRIN DELHKIKVGT MMGEGCIVGN SVVSQSGTVV GNSSRIAPLK TLSGSIPDGS LVV
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