Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_455 |
Symbol | |
ID | 8657395 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 422310 |
End bp | 423872 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003329937 |
Protein GI | 270307879 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000133416 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGATT TGCCCTTGTA TGCCCAGGCT ATGCTGAGAC CTGACTTTTA CCCCGAACCT ACCAGCAAAG TGGAGCTAGT GCAAACCCAG ATGTCTTTTG TTTTCCTGAC TGACCATTTT GCATATAAAA CCAAAAAAGC GGTTAATCTG GGATATCTGG ACTACTCTGA ACTGTCAGAA CGCAAAACCC TGTCAGAAAA AGAGCTGGTC CTAAACCGCC GTTTGTGTGA CTATGCCTAC CTTGAGGTTT TGCCTGTTAC TAAAAATGAG GGGGGTTATT CGCTGGGTGG ATGTGGGGAG GTGGTGGAAT ATACCCTGAA AATGCGAAGA TTACCCGAAG ACCGCATGTT GATAAATCTG CTGTCAACCG GCGGTGTCAG CAGCGGAATG CTGGAAAAAC TGGCTGAAAA ACTGGCCGTT TTCCATCAAA CCGCCAGAAC CGATGCCGAA GTCCAGAAAT ACGGCAACCT TGAGGCTATT AAATACAATA CCGAAGAAAA CTTTGAACAG ACCGGCAGTA AAGTTGGCCT TACCGTAAGC CCCGGTGAAT ACGCCCGTAT CAGTTCTTTT ACCCGCAGTT TTATATCTGA CAACCAAGCC CTTTTTAACG CACGGGTAAA CGGGGGCAAA ATACGGGACT GCCACGGAGA TTTGCATGCC GCCCATATCT GCTTTATGGA CAATATCTGC ATATATGACT GTATAGAGTT CAATGACCGC TTCAGATACG GGGATGTGGC TTCCGAAGTA GCTTTTTTGG CTATGGATTT AGACCATTAC GGCAAGGCTG ACCTTTCCCG CCTCTTTGTA AACAGCTATA TCCAAAAAAG CAAAGATACC GACCTTTATA AACTGCTCCG CTTTTATAAA TGCTACCGGG CTTATATCCG GGGCAAGGTG GAAGGCTTTA AGCTGGATGA TCCATATATC TCCGAGGCTG AAAAAGCCAA ATACGTCCAA AAATCCAAAA ATTATTACCA CCTGGCAGAT TTCTATGCCA AACCCAATCC CACCCTCTTT ATAACAACAG GGTTTTGCGG CTGCGGCAAG AGTACTCTTG CCCAAAGTCT GGCCGAGGTA TCCGGTTCGG TAGTTATTTC TTCGGATATT GTCCGCAAGG GACTATCAAA TATAGATTGC CATCAGCACT GTTTTGAAGA CGCTGACCAG GGCATATATT CGCCTGAGAT GACTAAGAAA ACCTATCAGG CCATGTTTGA CCAGGCTGGT AATGCCCTGA AGGAAGGCTA CTCAGTTATA CTTGATGCCA CTTTCTTAAA AGAAGACCAG CGAAAGCAGG CTGAAGAGTG CGCCAGCCAG AATAATGCCA AATTTGTGGT ACTGGAAGTC AAACTTTCAC CTGAGCTGGC TAAAAAAAGG CTTGAGGAGC GTCTGGACAA ACAGAGCGTC TCTGACGGGC GCTGGGAAGT GTATTTGAAG CAAATTAAGT CATTTGAGCC TCTGGCTGTT CAACTAAATC GTGTTATAAT TGATAGTTCT AAACCAACGG ATAAACAACT TTCAGACATA CTGGAGTTTT TTAAATCCAA TCAAGGAGAA TGA
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Protein sequence | MSDLPLYAQA MLRPDFYPEP TSKVELVQTQ MSFVFLTDHF AYKTKKAVNL GYLDYSELSE RKTLSEKELV LNRRLCDYAY LEVLPVTKNE GGYSLGGCGE VVEYTLKMRR LPEDRMLINL LSTGGVSSGM LEKLAEKLAV FHQTARTDAE VQKYGNLEAI KYNTEENFEQ TGSKVGLTVS PGEYARISSF TRSFISDNQA LFNARVNGGK IRDCHGDLHA AHICFMDNIC IYDCIEFNDR FRYGDVASEV AFLAMDLDHY GKADLSRLFV NSYIQKSKDT DLYKLLRFYK CYRAYIRGKV EGFKLDDPYI SEAEKAKYVQ KSKNYYHLAD FYAKPNPTLF ITTGFCGCGK STLAQSLAEV SGSVVISSDI VRKGLSNIDC HQHCFEDADQ GIYSPEMTKK TYQAMFDQAG NALKEGYSVI LDATFLKEDQ RKQAEECASQ NNAKFVVLEV KLSPELAKKR LEERLDKQSV SDGRWEVYLK QIKSFEPLAV QLNRVIIDSS KPTDKQLSDI LEFFKSNQGE
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