Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_4 |
Symbol | gyrB |
ID | 8656963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 3883 |
End bp | 5811 |
Gene Length | 1929 bp |
Protein Length | 642 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | |
Product | DNA gyrase, B subunit |
Protein accession | YP_003329513 |
Protein GI | 270307455 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTAT ACGAAGTATT GCGCCGGCCG TTAATATCTG AAAAGAACAG TGTTCATGCT ATGCAGAACA AGTACGCTTT TGAAATAGCC AAAGGGGCCA ACAAGCGTAT GGTAAAGCTG GCAGTGGAAC AGGCCTTTAA TGTAACGGTT GAAGATGTAA ATATGCTTCA CATACCGGGT AAGCAAAAGC GGATGGGGCG CAATCTGGTC CAAACCGCCG GGTTGCGTAA AGCCATCATC ACTCTCAAAG AGGGTGATAA AATAACTCTA TTTGAGGGTG TTTAG
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Protein sequence | MLDVNKAKPG ANSENYTASD IQVLEGLAAV RKRPGMYIGS TDQRGLHHLV YEIVYNSVDE AMAGVCDRIK VIMFKDGSVS VEDNGRGIPV DIHPVTKISA LETVMTVLHA GAKFGGKTYQ VSGGLHGVGA SVVNALAEWT TVKVRRNGKI YQQSYQRGKP STPLEEIGVS DGSGTTTIFK ADSQIFSTTE YDFEILTDRL REIAYLNKGL EVYIYDEQSD QERTYYFEGG ITGFVRHLNR NREVRHRQPI YITKKSDSTI LEVAIQYNDG YSDSTLTFAN CVNTIDGGTH LTGFRSALTR AFNDYAHKSK FLKDTDPNLM GDDVREGIVA IVSVKLPEPQ FEGQTKGKLG NIEIKSFVES AVAEQLSLYL EEHPDDTKRI LEKCITAAKA REAARKARDL IIRKSALDTG TLPGKLADCS ERDASLCELF LVEGDSAGGS AKQGRNRRFQ AILPLRGKIL NVEKASPDKM LAHEEIRAII TALAAGIDND FDPAKLRYNR LVLMTDADVD GSHIRTLLLT FFFRHMPRLI TESHLFIAQP PLYKIKIGST EHWVYNDAEK ETLLSQTKST KVDIQRYKGL GEMSAEQLWR TTMDPASRTL LEVKVEDAAK ADQIFNLLMG GEVAPRKAFI QSHSRTVKNL DI
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