Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_396 |
Symbol | ttdA |
ID | 8657338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | + |
Start bp | 384555 |
End bp | 385121 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | tartrate/fumarate hydratase family, beta subunit |
Protein accession | YP_003329880 |
Protein GI | 270307822 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.72991 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATATCCG GTATAAAACT GAATTCCCCG TTTAACCCTG CTGAACTGAA AAAACTGCAA GCCGGAGACA GGGTGCTGAT ATCCGGTATT ATATATGCCG CTCGTGATGC TGCCCATAAA CGGCTGGTGG AAGCCCTTAA TCAGGGCAAA CCGCTACCTT TTGACCTTAA AGGCCAGACT GTTTACTACA TGGGCCCTTC TCCTGCCAAA CCGGGTGAGG TTATAGGTTC AGCCGGCCCT ACTACCAGTA GCCGGATGGA CCGCTATACC CCGGAACTGC TGGATGCCGG ATTATTGGCT ATTATCGGCA AGGGCAACCG TTCGGCTGAG GTCAGCCGGG CTATTGTAAG TAAAAAGGCT GTTTATTTTA TATCGATAGG TGGGGCGGGG GCACTTCTCT CACAGCGTAT CAAGGAAAGC CGGATGGTGG CTTACCCTGA ACTTGGGGCG GAAGCTATAC TGGCGCTAAA GGTGGAGGAT TTTCCGGCTA TAGTGGCTAT TGACTCTCAG GGGAACAATG CTTTTACTCT TGGTCAGTCC ATTTACCGCA CGGCTAAGGA GGCCTGA
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Protein sequence | MISGIKLNSP FNPAELKKLQ AGDRVLISGI IYAARDAAHK RLVEALNQGK PLPFDLKGQT VYYMGPSPAK PGEVIGSAGP TTSSRMDRYT PELLDAGLLA IIGKGNRSAE VSRAIVSKKA VYFISIGGAG ALLSQRIKES RMVAYPELGA EAILALKVED FPAIVAIDSQ GNNAFTLGQS IYRTAKEA
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