Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_362 |
Symbol | |
ID | 8657304 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 348229 |
End bp | 349011 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | |
Product | amino acid ABC transporter, periplasmic binding protein |
Protein accession | YP_003329847 |
Protein GI | 270307789 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000000733431 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGCGCT TAAGTACTAT CCTTATGTCC CTGCTCCTGT CCAGCGCATT GCTGTTTTCT GGCTGCCAAA GCTCTAATGA TGACACCGAC AATACTGATA ACAGCACCAC AAAAATACAG GTTACTGTAG TAACCGATGC CACTTGGGCT CCTTTTGAGT ATGTTAATGA ACAGACTCAT GCGATAGAGG GTTTTGATAT AGACCTGATG AAAGCTATTG CCGAAAAGGC CAATTTGGAA GTCACCTTCC AAAACGTAGC CTGGGACGCT TTGCTAGCAG GTATGGCTAC CGGTCAGTAT AAAGTAGCTA TTTCCTCAAT CACCATTACT GCTGAACGGG CCGAAAAATG GCTCTTTTCA GACCCCTATT TCAATGCCGG CCAGATGGTC TGCGTACAGA AAAACAACAC CACTATCCTG AGCCATAACG ACCTCACCGG TAAAAAGGTT GCAGCCCAGA CCGGAACCAC CGGATTTATA GAAGCTCAGA AAATAGAGGG AGCTACTGTT AAATCGTATG ATGAAATTGG CCTGGCTTTT CAGGACCTTA TGAATGGCCA GATTGACGCC GTTATCTGTG ATACCCCCGT TGCCATAGAT TATGTAAATG CCAACCCTGA CAAAATCAAG AAAGTTGGCA CTGCTTTCAC TGACGAATAC TACGGCATCT CAGTAGCTAA AGGCCAAACA GAGATTCTGG CCAGGATCAA CCAAGGTCTG GCAGCCGTCA TAGCCGACGG CACCTTTGAC CAACTGGTAG CCAAGTGGAA CTTAAATCCG TAA
|
Protein sequence | MKRLSTILMS LLLSSALLFS GCQSSNDDTD NTDNSTTKIQ VTVVTDATWA PFEYVNEQTH AIEGFDIDLM KAIAEKANLE VTFQNVAWDA LLAGMATGQY KVAISSITIT AERAEKWLFS DPYFNAGQMV CVQKNNTTIL SHNDLTGKKV AAQTGTTGFI EAQKIEGATV KSYDEIGLAF QDLMNGQIDA VICDTPVAID YVNANPDKIK KVGTAFTDEY YGISVAKGQT EILARINQGL AAVIADGTFD QLVAKWNLNP
|
| |