Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_338 |
Symbol | |
ID | 8657280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 328725 |
End bp | 330095 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003329823 |
Protein GI | 270307765 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00693249 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGGTTT TAATAGCCAT TGATACAGCC ACCCCGGACA CCGGGCTGGC TATTCTTAAA GATAATGAAA TAGTGGCCCA GTACAACTGG CTCAGTCACC AGAACCAGAC GGTAGAGCTG TTGCCCCGTT TGGAGTGGCT GCTTGAGTCA GCCGGGCTAA GCCTTAAAGA TGCCTCCGCC ATTGCGGTTT CCATAGGGCC GGGCAGTTTT AATGGTCTAA GAGTAGGTCT GAGCACCGCT AAAAGTCTGG CTTTTGCACT GGATATACCT CTGTGCGGTA TCGGCACGCT GGAGCTGGCC GCTTACCCAT ATCTGGCAAG CGGGCTTAAA GTATGGGCGC TCTTGCCTTC GGGTCAGCAG GAATATGCCG CAGGGGCTTA CGTAAAAGAT GGAGAGGGTT TAAAAGAGAC GGCAAAACCC TATATAACCA ATCTGGCTGA TTTAGCCGCT GAAATCAGCG AACCGTGTGT TATCTGCGGG CCGATAAGCC AAACCACCCA AGATGAACTT AAAACCCTGC TTGGGGGTAA AAAAATAGTA TTTGCCCCCG CTGATATACG CCCCTCAAGG GCAGCCTCGC TGGCAAGGCT GGCTAAAAAG AGGATTGAAG ACGGCCTGAC TGACAGCCCT GCCGGTCTAC AGCCGCTTTA CCTGCGCCGC CCCCAGATAT CCCCCCGGAA ACACCGCACC GGCCTGCCTC TCTCCCAAAA CAAAGCCGTT ATCTGGGATA TGGACGGGGT AATTGCAGAT TCCGCCCCTT TTCATATGCG AGCATGGCAG ACTACTTTTG CGGAGATAGG TTATACTTTT TCCGCAGCAG ATTTTTACCG TACCTTCGGC CTGCGGAATG ACATGATAAT TTACTCGGTG CTGGGTGAAA AGTCAGATGC GGATACCATC CACACTCTGG CTGACCGCAA GGAACATCTT TTCCGTGAAT ACGCCGGGCA GGAGATAAGG CTGTTTCCCG GTGTGATAGA ACTTTTAAAA TCCCTGAAAC CAGCCGGTTA CCGCATGGCT ATTGCATCTT CGGCACCGCT GGCCAATATC AAGCTGGTTA TGGCTAAACT GGGTATAGGG GACTACTTCC TGGCTACAGT CAGCGAAAAG GATGTCACCA AGGGCAAGCC CAACCCCCAG GTGTTTTTGC TTGCGGCCGC CAGACTGTGC GCCAGCCCGG AAGAGTGCCT GGTAATAGAA GACGCACCCG CCGGAGTGGA AGCCGCTAAA AAAGCTGGTA TGAAATGCAT AGCTGTTACC AACAGCCAGC AACCCCAAGC CCTGAGCGAA GCTGATATGA TAGTTGACAC CCTGGGCAAG ATTAGTGTAG AAGATATAGC CGGTTTTATA GGTTTGGCCG GCACTAAATA A
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Protein sequence | MPVLIAIDTA TPDTGLAILK DNEIVAQYNW LSHQNQTVEL LPRLEWLLES AGLSLKDASA IAVSIGPGSF NGLRVGLSTA KSLAFALDIP LCGIGTLELA AYPYLASGLK VWALLPSGQQ EYAAGAYVKD GEGLKETAKP YITNLADLAA EISEPCVICG PISQTTQDEL KTLLGGKKIV FAPADIRPSR AASLARLAKK RIEDGLTDSP AGLQPLYLRR PQISPRKHRT GLPLSQNKAV IWDMDGVIAD SAPFHMRAWQ TTFAEIGYTF SAADFYRTFG LRNDMIIYSV LGEKSDADTI HTLADRKEHL FREYAGQEIR LFPGVIELLK SLKPAGYRMA IASSAPLANI KLVMAKLGIG DYFLATVSEK DVTKGKPNPQ VFLLAAARLC ASPEECLVIE DAPAGVEAAK KAGMKCIAVT NSQQPQALSE ADMIVDTLGK ISVEDIAGFI GLAGTK
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