Gene DhcVS_338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhcVS_338 
Symbol 
ID8657280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. VS 
KingdomBacteria 
Replicon accessionNC_013552 
Strand
Start bp328725 
End bp330095 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content52% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003329823 
Protein GI270307765 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00693249 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGGTTT TAATAGCCAT TGATACAGCC ACCCCGGACA CCGGGCTGGC TATTCTTAAA 
GATAATGAAA TAGTGGCCCA GTACAACTGG CTCAGTCACC AGAACCAGAC GGTAGAGCTG
TTGCCCCGTT TGGAGTGGCT GCTTGAGTCA GCCGGGCTAA GCCTTAAAGA TGCCTCCGCC
ATTGCGGTTT CCATAGGGCC GGGCAGTTTT AATGGTCTAA GAGTAGGTCT GAGCACCGCT
AAAAGTCTGG CTTTTGCACT GGATATACCT CTGTGCGGTA TCGGCACGCT GGAGCTGGCC
GCTTACCCAT ATCTGGCAAG CGGGCTTAAA GTATGGGCGC TCTTGCCTTC GGGTCAGCAG
GAATATGCCG CAGGGGCTTA CGTAAAAGAT GGAGAGGGTT TAAAAGAGAC GGCAAAACCC
TATATAACCA ATCTGGCTGA TTTAGCCGCT GAAATCAGCG AACCGTGTGT TATCTGCGGG
CCGATAAGCC AAACCACCCA AGATGAACTT AAAACCCTGC TTGGGGGTAA AAAAATAGTA
TTTGCCCCCG CTGATATACG CCCCTCAAGG GCAGCCTCGC TGGCAAGGCT GGCTAAAAAG
AGGATTGAAG ACGGCCTGAC TGACAGCCCT GCCGGTCTAC AGCCGCTTTA CCTGCGCCGC
CCCCAGATAT CCCCCCGGAA ACACCGCACC GGCCTGCCTC TCTCCCAAAA CAAAGCCGTT
ATCTGGGATA TGGACGGGGT AATTGCAGAT TCCGCCCCTT TTCATATGCG AGCATGGCAG
ACTACTTTTG CGGAGATAGG TTATACTTTT TCCGCAGCAG ATTTTTACCG TACCTTCGGC
CTGCGGAATG ACATGATAAT TTACTCGGTG CTGGGTGAAA AGTCAGATGC GGATACCATC
CACACTCTGG CTGACCGCAA GGAACATCTT TTCCGTGAAT ACGCCGGGCA GGAGATAAGG
CTGTTTCCCG GTGTGATAGA ACTTTTAAAA TCCCTGAAAC CAGCCGGTTA CCGCATGGCT
ATTGCATCTT CGGCACCGCT GGCCAATATC AAGCTGGTTA TGGCTAAACT GGGTATAGGG
GACTACTTCC TGGCTACAGT CAGCGAAAAG GATGTCACCA AGGGCAAGCC CAACCCCCAG
GTGTTTTTGC TTGCGGCCGC CAGACTGTGC GCCAGCCCGG AAGAGTGCCT GGTAATAGAA
GACGCACCCG CCGGAGTGGA AGCCGCTAAA AAAGCTGGTA TGAAATGCAT AGCTGTTACC
AACAGCCAGC AACCCCAAGC CCTGAGCGAA GCTGATATGA TAGTTGACAC CCTGGGCAAG
ATTAGTGTAG AAGATATAGC CGGTTTTATA GGTTTGGCCG GCACTAAATA A
 
Protein sequence
MPVLIAIDTA TPDTGLAILK DNEIVAQYNW LSHQNQTVEL LPRLEWLLES AGLSLKDASA 
IAVSIGPGSF NGLRVGLSTA KSLAFALDIP LCGIGTLELA AYPYLASGLK VWALLPSGQQ
EYAAGAYVKD GEGLKETAKP YITNLADLAA EISEPCVICG PISQTTQDEL KTLLGGKKIV
FAPADIRPSR AASLARLAKK RIEDGLTDSP AGLQPLYLRR PQISPRKHRT GLPLSQNKAV
IWDMDGVIAD SAPFHMRAWQ TTFAEIGYTF SAADFYRTFG LRNDMIIYSV LGEKSDADTI
HTLADRKEHL FREYAGQEIR LFPGVIELLK SLKPAGYRMA IASSAPLANI KLVMAKLGIG
DYFLATVSEK DVTKGKPNPQ VFLLAAARLC ASPEECLVIE DAPAGVEAAK KAGMKCIAVT
NSQQPQALSE ADMIVDTLGK ISVEDIAGFI GLAGTK