Gene DhcVS_315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhcVS_315 
Symboldxr 
ID8657258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. VS 
KingdomBacteria 
Replicon accessionNC_013552 
Strand
Start bp308252 
End bp309385 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content53% 
IMG OID 
Product1-deoxy-D-xylulose 5-phosphate reductoisomerase 
Protein accessionYP_003329802 
Protein GI270307744 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTCATT CAATAAAGAA AATCGTCATA CTGGGGTCTA CCGGTTCTAT CGGCCGCCAG 
ACTCTGGAAG TTATCCGTTC GTTGCCAGAC CGATTTAAGG TGCTGGGGCT GGCCGGCGGC
TCAAACATAA ACCTGCTGAA AGAACAGGCG AGCGAATTCC GCCCTGAATA CATCTACTGC
CAAAACTGCC ATGATACTAA TGCCTGTACC GCCCGTTTTA TCCCCATGGA GGAAATGGCC
TCCCTGCCTG AAGCAGACGT AATAGTAGTG GCCGCACCCG GCAGTACCGG TTTACAGCCG
GTGCTTGCCG CCGCCAGAGC CGGCAAGGTA ATAGCTTTGG CCAACAAGGA ATCCCTCGTT
TCCGCCGGAG AGATAGTAAC CGCCACCGCA CGGGAAAACA AAGCTAAAAT ACTGCCGGTA
GACAGTGAAC ACAGCGCTAT CTGGCAGTGT TTATCAGGCG AGGTCACGCC CCCCGCCCGG
ATTATCCTGA CCGCCTCAGG CGGGCCTTTC CGTTCCTTAA CTAAAGACGA AATAGATAAA
GTCACCCCCG AACAGGCACT CAGGCATCCC TCTTGGAAAA TGGGGGTTAA GGTTACCATA
GACTCAGCCA GCCTAATGAA CAAAGGACTG GAGATAATAG AAGCCCGCTG GCTGTTCGAT
ATGCCGGTAC GGAATATTCA GGTGGTTATC CACCCGCAGA GCATTATCCA CTCTATGGTG
GAGTTTGCAG ACGGCAGCCT TAAAGCCCAG TTGTCACGAC CGGATATGCG CTTCCCTATT
CAGTATGCTC TAACCTACCC GGAAAGAATG ACCAATCACA CCCTACCCCG CCTTAACTGG
GCAGAAGTGG GCAAGCTGGA CTTTGAAATG CCAGACATGA CCAGATTCCC CTGCTTAGGT
TTGGCTATAT CCGCCGGAGA AGAGGGGAAA ACGTATCCGG CAGCACTGTG TGCCGCAGAC
GAAGTGGCTG TTGAGATGTT CCTGAAGGGA CAAATAAGCT TCGGGCAGAT ACCCGAACTG
ATAGCCAAAG TACTGGATGC CCATCAGGCT GTTACCAGCC CGTCTCTGGA TGATATTCTG
GCCGCAGATG CCTGGGCACG CCAAAAAGTA ACTGAACTGG CAGGTAATCT TTAA
 
Protein sequence
MVHSIKKIVI LGSTGSIGRQ TLEVIRSLPD RFKVLGLAGG SNINLLKEQA SEFRPEYIYC 
QNCHDTNACT ARFIPMEEMA SLPEADVIVV AAPGSTGLQP VLAAARAGKV IALANKESLV
SAGEIVTATA RENKAKILPV DSEHSAIWQC LSGEVTPPAR IILTASGGPF RSLTKDEIDK
VTPEQALRHP SWKMGVKVTI DSASLMNKGL EIIEARWLFD MPVRNIQVVI HPQSIIHSMV
EFADGSLKAQ LSRPDMRFPI QYALTYPERM TNHTLPRLNW AEVGKLDFEM PDMTRFPCLG
LAISAGEEGK TYPAALCAAD EVAVEMFLKG QISFGQIPEL IAKVLDAHQA VTSPSLDDIL
AADAWARQKV TELAGNL