Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_315 |
Symbol | dxr |
ID | 8657258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 308252 |
End bp | 309385 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
Protein accession | YP_003329802 |
Protein GI | 270307744 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTCATT CAATAAAGAA AATCGTCATA CTGGGGTCTA CCGGTTCTAT CGGCCGCCAG ACTCTGGAAG TTATCCGTTC GTTGCCAGAC CGATTTAAGG TGCTGGGGCT GGCCGGCGGC TCAAACATAA ACCTGCTGAA AGAACAGGCG AGCGAATTCC GCCCTGAATA CATCTACTGC CAAAACTGCC ATGATACTAA TGCCTGTACC GCCCGTTTTA TCCCCATGGA GGAAATGGCC TCCCTGCCTG AAGCAGACGT AATAGTAGTG GCCGCACCCG GCAGTACCGG TTTACAGCCG GTGCTTGCCG CCGCCAGAGC CGGCAAGGTA ATAGCTTTGG CCAACAAGGA ATCCCTCGTT TCCGCCGGAG AGATAGTAAC CGCCACCGCA CGGGAAAACA AAGCTAAAAT ACTGCCGGTA GACAGTGAAC ACAGCGCTAT CTGGCAGTGT TTATCAGGCG AGGTCACGCC CCCCGCCCGG ATTATCCTGA CCGCCTCAGG CGGGCCTTTC CGTTCCTTAA CTAAAGACGA AATAGATAAA GTCACCCCCG AACAGGCACT CAGGCATCCC TCTTGGAAAA TGGGGGTTAA GGTTACCATA GACTCAGCCA GCCTAATGAA CAAAGGACTG GAGATAATAG AAGCCCGCTG GCTGTTCGAT ATGCCGGTAC GGAATATTCA GGTGGTTATC CACCCGCAGA GCATTATCCA CTCTATGGTG GAGTTTGCAG ACGGCAGCCT TAAAGCCCAG TTGTCACGAC CGGATATGCG CTTCCCTATT CAGTATGCTC TAACCTACCC GGAAAGAATG ACCAATCACA CCCTACCCCG CCTTAACTGG GCAGAAGTGG GCAAGCTGGA CTTTGAAATG CCAGACATGA CCAGATTCCC CTGCTTAGGT TTGGCTATAT CCGCCGGAGA AGAGGGGAAA ACGTATCCGG CAGCACTGTG TGCCGCAGAC GAAGTGGCTG TTGAGATGTT CCTGAAGGGA CAAATAAGCT TCGGGCAGAT ACCCGAACTG ATAGCCAAAG TACTGGATGC CCATCAGGCT GTTACCAGCC CGTCTCTGGA TGATATTCTG GCCGCAGATG CCTGGGCACG CCAAAAAGTA ACTGAACTGG CAGGTAATCT TTAA
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Protein sequence | MVHSIKKIVI LGSTGSIGRQ TLEVIRSLPD RFKVLGLAGG SNINLLKEQA SEFRPEYIYC QNCHDTNACT ARFIPMEEMA SLPEADVIVV AAPGSTGLQP VLAAARAGKV IALANKESLV SAGEIVTATA RENKAKILPV DSEHSAIWQC LSGEVTPPAR IILTASGGPF RSLTKDEIDK VTPEQALRHP SWKMGVKVTI DSASLMNKGL EIIEARWLFD MPVRNIQVVI HPQSIIHSMV EFADGSLKAQ LSRPDMRFPI QYALTYPERM TNHTLPRLNW AEVGKLDFEM PDMTRFPCLG LAISAGEEGK TYPAALCAAD EVAVEMFLKG QISFGQIPEL IAKVLDAHQA VTSPSLDDIL AADAWARQKV TELAGNL
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