Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_28 |
Symbol | trkH |
ID | 8656985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 25674 |
End bp | 27119 |
Gene Length | 1446 bp |
Protein Length | 481 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | cation transport protein, Trk system |
Protein accession | YP_003329535 |
Protein GI | 270307477 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAAAA CAAGTTTCGT TCCCAATCCC GCCAGAATTA AAGTATTCGG CTGTGGCGGC GGCGGTTGCA ATGCTGTTAC CCGCATGGTC CGTGAAGAAA TACAGGGCGT TGAATTTATT GCTATCAACA CTGATGCCCA GGCTTTGGCT ATCACTGAAG CTCCTATCCG CCTCCAGATA GGCGAAAGAG TTACCCGCGG TTTGGGTGCT GGCGGCGACC ATAACATGGG TCAGAAGGCG GCCGAAGAGA GCCGTGATGA AATCCGTGAG ATAGTTAACG GGGCGGATAT GGTCTTTGTA ACTGCCGGCA TGGGCGGCGG TACCGGCACA GGTTCTGCTC CCATTGTAGC CGAAGAATCT AAGAAAAGCG GCGCTTTGAC TATTGCCGTT GTTACCAAGC CCTTCACTTT TGAAGGTGCT CACCGTGCCT CTACCGCCAA AGAAGGCATT AACCGCCTGC TGGGCAAGGT AGATACCCTG ATTATTATCC CTAATGACCG TTTGCTGGAT TTGTGCGACC AGAAGACCGG CGTTGATGCT GCCTTCAAAA TGGCTGATGA TGTACTGCGC CATGGCGTAC AGGCTATCTC CGAGGTAATC ACCGTTCCCG GTTTGATTAA CCTGGACTTT GCTGATGTGC GTGCCGTTAT GCGGGATGCC GGCCCGGCCT GGATGTCTAT CGGTTATGGT TCCGGCAAAA ACAGGGCTTC AGATGCCGCC AAGAGCGCTC TGGCCAGCCC CTTGCTGGAT GTTTCCATCA CCGGCTCCAA GGGTGTTCTT TTCAATATAG TGGGCGGTCC TGACCTGAGC CTTATGGAAG TTAACGAAGC AGCGGATGTT ATTAAGCAGG CAGTTGATCC TGACGCCAAC ATCATTTTCG GTGTGGCTTC AGACTCATCC ATGGGTTCAA ATGTAAAGAT AACCCTGATT GCTACTGGTT TTGTTTCCAA GATTGGTATG GCCGAAGAAG AGGGGGATGA TGCCATTACC CGCCAGCTGA AAGGTATCAA GACCGAAGAC GAGCTGGATG TACCTTCCTT CCTGCGGAGA CCGTTATTCA ATCGGGCTCG CCCGGTTGCA CCGCCGGTGG ATACCCGCTC TAACAAGCCC TCTTCCAGGA TTTCCTGGTA A
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Protein sequence | MKINNVLHYL GLVVAIVGGF MFIPFIFSLI NAGPDQLAFG ISIIVTLSAG FLLWRFTPIT ERRISLRESL AIVAGSWIMA ALFGSLPFII SGVLPSVIDC IFEAMSGLTT TGASVFSNVE NLPQGILVWR SLTQWIGGLG IIMLFVTILP MLGIGASQLM EAETPGQQER LTSRIRDTAR TLWLLYLGFT VAGFIALVIA GLPGFDAFNI ILTTTPTGGF APVSSIGVYN NLAVELILIF FMVASGINFG LYYYLLWKGR PAKFFGNPEF KLYIGILVGC ILLINWDLVA NAGINIFEGL RQASFQTASV MTTTGFATAD FAQWPHFSQA ILLVLMVVGA SAGSTGGGLK VIRLLVLFKY TYRRILLTFN PNAVIPIKIG GNVISDKLIS RSVGLTILYF ATLWAGFLIM SAIGLDFVTA LSSITSCLGN IGPALGTVGP MASYADIPGI GKVVLLTAML VGRIELFTLL VLFVPAFWRW R
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