| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_278 |
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| Symbol | priA |
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| ID | 8657222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. VS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013552 |
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| Strand | - |
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| Start bp | 271385 |
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| End bp | 273832 |
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| Gene Length | 2448 bp |
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| Protein Length | 815 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | |
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| Product | primosomal protein N, (replication factor Y) (superfamily II helicase) |
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| Protein accession | YP_003329767 |
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| Protein GI | 270307709 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0311908 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCTTTTG CCGAACTGGC CGTAAACACT CCGGTACTTA GACCGGGCAG TTTTTCCTAC
TCCATACCAT TGGGGTTAGA AATAAAACCC GGCCAGGCGG TCTGGGCTCC TTTCGGACCT
AAAATAGTTC AGGGCATAGT CCTTGAAATA ACTGACCAGC CGGCATTCGG GCAAACACGT
GAAATCTGCG GCGTTATCTC TGATACGCCG CTTCTTTCTT TTCACCAGCT AAAGTTAGCC
AAGTGGATAA GCCAAACCTA TTTATGCAGT ATTTACGAAG CAGTAGCCCT CATGCTGCCG
CCGTCTTTTG AACGCCAAAG CCTGGCCTAT ATCAGCCTGG AGACCACCCC GCCAGCTACA
ACAAAAAACC CGTCTGAAAC CCTAAGCCCA AATATGCAAA AAATATTTGA CCGGCTAAAA
GCCGGAGATG TTACTCCCCA GAGTGAACTG GAAAAAATAT TCGGCAAGAA AACCACCCAA
AACGCCCTAA TCAAACTTAT AAATCAGGGG CTGGTAAAAC GCACCTACCA GATAAGCCCT
GCAAGGGTAC AAACCAAATT TGAAAAACAC TTCCGCCTGA GCGGGCAGGC ATTGGCATTT
ATTAAAAACC AGAATCTCCC TAAGTTATCC CCCCGCCAGA CAGATATTTT TGAGTGCCTG
CGGAAAAATC CGCTAGGCAT TGCCAAGAGC CAGCTGAACC TGCTCTTTAA AAATAATTCG
GCCGTCTTAA AGGCTCTTGA ACAAAAGGGG CTGGTAAGTA CCGAAGAACA TCAGGTATTC
CGCCAGCCCG TAGATTACAA TCAAATAACC CCCATGCTGC ACCTTGAGCT AAGCCCTCCT
CAGGCAAAGT GTTTGCAGGC CATCACCCAT TCCCTGAATA CCCTGCCTGA AAATGACCCG
AATCCCCGAA TATTTTTACT TCATGGCATA ACCGGCAGCG GTAAAACCGA AATATATCTG
CAGTCACTGG CTGAAACCCT GCGTCTGGGC AGAAAGGGTA TTGTACTGGT ACCCGAAATA
TCCCTTACCC CCCAGACTAT TGCCCGTTTT GCAGGGCGTT TCCCCGGCAA AATAGCCGTG
CTGCACAGCC GCCTCAGTCC GGGTGAACAG TTTGACGAAT GGCAAAGGAT AAAAAACGGT
CAGGCAGATA TCGTAATCGG CCCCAGAAGC GCCCTTTTTG CCCCTCTGGA CAAACCCGGC
ATTATCATCA TAGACGAAGA GCATGAATGG ACATATAAAC AGCAGGACCC GCAGCCGCGT
TATCATACCC GCACCGTTGC TAATAAAATG GCTGAAGAGT ACGGTACTGT AGTGGTACTT
GGCAGTGCCA CTCCGGATAT TGACAGCTAT TTCAAAGCCA AACACGGCAT TTACCAGCTT
CTGGAACTGC CCGAACGCCT GACCCCCTAT AGAGGCGCTT CCCTGCCAAA AACCGAGCTG
GTAGATATGC GCACCGAACT CTCCGAGGGC AACCGCAGCA TTTTTTCCCG CAACCTGCAC
GCCTCCATTG AAAAAGTACT TGCAAACCAT GAGCAGGCCA TTTTATTCAT AAACCGCCGG
GGCGGTGCCA GTTTTATCCA GTGCCGTGAT TGCGGTTATG TAGCCATGTG CAAAAGCTGT
GATGCTCCGC TCACATATCA CCCTGACCAG GAAAATCTGG TCTGTCATCA GTGCGGCAGG
CAATACCCCA ACCCTCTTAC CTGCCCAAAA TGCAGCAGCC GCAGGATTAA ATACCTTGGT
ATAGGCACCC AGAAACTGGA GGAAGAAACA AGACTGGCTT TTCCACAGGC AAGACTGCTG
CGCTGGGATA GTGACGTAAC CAGAGGCAAA AATAACCACC AGCAGATAAT GGATACGTTC
AGCCGCCATC AGGCAGATAT ACTTATCGGC ACCCAGATGG TAGCCAAAGG GCTTGACCTG
CCTGCAGTTA CTCTGGTAGG AGTAATAAAC GCGGATATCA GCCTGAACTT GCCTGATTTC
AGGGCAGGCG AACGTACGTT CCAGCTGCTG GCACAGGTAG CCGGACGGGC AGGCCGGGGT
ATATCAGGAG GGAAAGTGAT TATCCAGACC TATACGCCCG AAAACTACGC CATTCAGGCA
GCAGTTTGCC ATGATTATCA GGGTTTTTAT GCCAAGGAGA TAACCTACCG CCGGGAACTG
AATAACCCTC CTTTCCGGAA ATTAGCCTGC ATTGTTTTCA GCCATTTAAA CCATGACTTT
TGCCGGCAAC AGGCTGAAGT TATGGCTGAA ACCTTCCGGG AAAAAGCTGA TGCAGGCGGT
TCAGGCAGTC TGGAAATTTT AGGGCCGGCT CCCGCTTTCA TCCAACGTCT GCGGGGACGC
TATAGGTACC AACTAATACT GCGCTCACCA AACCCGGCAG ATTTCCTTCG GAATATCAGT
TTTGGACAGG GCTGGAGTAT TGACCTTGAC CCATATGGCT TGTGCTAA
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| Protein sequence | MAFAELAVNT PVLRPGSFSY SIPLGLEIKP GQAVWAPFGP KIVQGIVLEI TDQPAFGQTR
EICGVISDTP LLSFHQLKLA KWISQTYLCS IYEAVALMLP PSFERQSLAY ISLETTPPAT
TKNPSETLSP NMQKIFDRLK AGDVTPQSEL EKIFGKKTTQ NALIKLINQG LVKRTYQISP
ARVQTKFEKH FRLSGQALAF IKNQNLPKLS PRQTDIFECL RKNPLGIAKS QLNLLFKNNS
AVLKALEQKG LVSTEEHQVF RQPVDYNQIT PMLHLELSPP QAKCLQAITH SLNTLPENDP
NPRIFLLHGI TGSGKTEIYL QSLAETLRLG RKGIVLVPEI SLTPQTIARF AGRFPGKIAV
LHSRLSPGEQ FDEWQRIKNG QADIVIGPRS ALFAPLDKPG IIIIDEEHEW TYKQQDPQPR
YHTRTVANKM AEEYGTVVVL GSATPDIDSY FKAKHGIYQL LELPERLTPY RGASLPKTEL
VDMRTELSEG NRSIFSRNLH ASIEKVLANH EQAILFINRR GGASFIQCRD CGYVAMCKSC
DAPLTYHPDQ ENLVCHQCGR QYPNPLTCPK CSSRRIKYLG IGTQKLEEET RLAFPQARLL
RWDSDVTRGK NNHQQIMDTF SRHQADILIG TQMVAKGLDL PAVTLVGVIN ADISLNLPDF
RAGERTFQLL AQVAGRAGRG ISGGKVIIQT YTPENYAIQA AVCHDYQGFY AKEITYRREL
NNPPFRKLAC IVFSHLNHDF CRQQAEVMAE TFREKADAGG SGSLEILGPA PAFIQRLRGR
YRYQLILRSP NPADFLRNIS FGQGWSIDLD PYGLC
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