| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_24 |
|---|
| Symbol | comEA |
|---|
| ID | 8656981 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. VS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013552 |
|---|
| Strand | - |
|---|
| Start bp | 23425 |
|---|
| End bp | 23925 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | |
|---|
| Product | competence protein |
|---|
| Protein accession | YP_003329531 |
|---|
| Protein GI | 270307473 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0000137155 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGAAA TTAATGAAAT AAAAGACTCT ATCCCAAGGG TTAGGGTTGA TCAGCTGCTC
GATGTACTTT CGGAAGTGGC TTCGTCAACG GTAAGATGCT CTTTTGACCA GGTAAGAAAC
TATCTCTATA AAACGGCTAA ACGGAAAGCT CCGCCATCCC GTGAAGCAAG TTGGACGGTA
GCGCGCGATG TGCTTTCGGA TCTTCAACGC TTCAACTTCT TAAAATCAGG CCCCTTACCC
CGAAAACGTT CAGAAGTGGA CCGTCTTCGG GAGACCCCGT GCGAAATTAC GGATAGCGGA
TCAGAATTGG CCCGCTTATA CCGAGAAAAA CGGGCGGAGG CTTTTAATAA GCTTTTAATA
GCTTGGATGA GCGGACATCC TTACTTTAGA ACGATGAACT TACGCTTGCT ACGTGGTCCG
ATGTACATCC CGGACATCAC GGGGATTAAA CAGCTCGGCA AGGATCTCAC ATTCCCCCCC
AAACGCGACA TGCTCGGAGA TAGAATCAAA GAAACATGTA GTGCCAGACT AAAATCAATC
GAGTATCCCG AAGAAAAGAT TACTGTCTTT TTAGACACGG TAGAGAAAAG ATTAGACCGT
CTTGGAGAAT TCGCTTCCGA GGCTCATTTA GACGCAAAAA AATTAGTCGA CATCATCGAG
GATAATGTCG TAGTTCCGGC ATTATTGGAA TCTGAGAGTC TGTTTTTTGA CTCCATTACA
CTTCAGCATC TCATAGGATG CGCCCAAGAC TTTTATAGTG CTTCCGTGAC ATCTTCATAT
CCAGGATTCA CCGGTAGGGT GCTTTTCTCA ACTTGCGATT TTTCTCCAGA CCCAACCACC
AATCCAGCAG TTGAAATAAC CGACGTAATT CATCACGGGC GGTCCCTTGT TTCAGACCGG
TTTGCTGATA TATTGCTTTC TTCTTATAAA CAGCTAGCAA GTCCTTCAAT GGGCTACGTG
GACATATACG CTTTGCGGGC TCTGGTTTGC GTAAAACTCA AGATTCAGCC CGTGGTTTTC
GCTCTGTGCC TTGAACAGGC AATAGAGGAA GGGCTGAAAG AAGGAACATC AATTTATACC
GAGCTTCCTT TCAATCCACA TCCGACTGGA GAAACATATG TGGAAATAAG GGGAAAACGT
ATCGGAATGA TAAAATTGAC ATTCACAAAA GGAGGATAG
|
|---|
| Protein sequence | MKVTKKFALL LGLALSLITA QGCSETAPLE VYTPSQISQN QLEINISGNI KLPGIYPGNT
QDTLQSLLEA AGGLMDNSEL ATIYLSFNPS VSASSAQKID LNRAEIWLLV ALPGIGEARA
NDIITYRNQN GGFKNTLELM LIPGFSQSLY DQIKDLICVF ETADMP
|
|---|
| |