Gene DhcVS_1520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhcVS_1520 
Symbol 
ID8658446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. VS 
KingdomBacteria 
Replicon accessionNC_013552 
Strand- 
Start bp1410052 
End bp1410750 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content54% 
IMG OID 
ProductZn-dependent protease 
Protein accessionYP_003330943 
Protein GI270308885 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.000439151 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTTGT ATCTGCTGTT TATGCTGCCT CCCCTGGCGC TGATGCTGTA TGCCCAGTGG 
CGGGTAAGCA GTTCTTTTAA AAAATATTCC AAAGTGGGCA ATCTGGCCGG TCTCAGCGGT 
CTTCAGGCGG CCAGAAGGCT GCTGGACGAA CACGGGCTGG GAAATGTTCA GGTGGAGCTT 
ACCAAGGGCA AGCTTTCAGA CCACTATGAC CCCAGAGCCA AGGTACTCAG GCTGTCTCCC 
GAAGTAGCCA ATACCGCTTC GGTGGCTTCT ATAGGTATTG TTGCCCATGA AGTAGGCCAT 
GCGGTTCAGG ACAGGGAGTT TTACGCCCCC CTGAAAGTCC GTAATTCCCT TTTCCCGGTT 
GCCAGTTTCG GCAGTCAGTT CGGTTTCATT CTGGTACTGC TGGGATTGTT CCTTTATGGC 
TTCTCTTTGT CCTTCGGTCT TTCGGTTGCC TGGGCGGGGG TTGCTTTATT TGCGGTGGCG 
GTAATATTTT CGCTCATTAC CCTGCCGGTG GAGTTTAACG CTTCCAGCAG GGCCATGGCT 
ATGCTTAGCG GCGGCTCACT GGTTTCGGTC AGAGAGTCAG CCGGGGTCAA AGCAGTACTG 
GGTGCGGCAG CCCTTACTTA CGTGGCGGCT TTGCTTCAGG CGGTAGGCCA GCTGCTTTAT 
TTTGTGCTTA TGCTGGTAGG GTTCGGGCGG AGAGACTAA
 
Protein sequence
MFLYLLFMLP PLALMLYAQW RVSSSFKKYS KVGNLAGLSG LQAARRLLDE HGLGNVQVEL 
TKGKLSDHYD PRAKVLRLSP EVANTASVAS IGIVAHEVGH AVQDREFYAP LKVRNSLFPV 
ASFGSQFGFI LVLLGLFLYG FSLSFGLSVA WAGVALFAVA VIFSLITLPV EFNASSRAMA 
MLSGGSLVSV RESAGVKAVL GAAALTYVAA LLQAVGQLLY FVLMLVGFGR RD