| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_1477 |
|---|
| Symbol | |
|---|
| ID | 8658402 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. VS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013552 |
|---|
| Strand | - |
|---|
| Start bp | 1374346 |
|---|
| End bp | 1374792 |
|---|
| Gene Length | 447 bp |
|---|
| Protein Length | 148 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_003330902 |
|---|
| Protein GI | 270308844 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000000903264 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTGT CAGCCCGTGG CAGGCATTCT ATGGAAGCCA TGTTTGACCT GGCGGTTCAT
TACGGTGAAG GCCCTATTTT GATTCGTGAT GTAGCCCAGC GGCGAAAAAT ATCCGAACAG
TATCTGGCCC AGCTTTTTAT TCCCTTGAGG ATAGCCGGAT TGGTTAGAAG TGTCCGCGGG
GCAAATGGCG GTTTTGTACT GGCCAGAGAT CCCAAAGAAA TAAGACTGAG TGATATAGTA
AAAGCTACCG AAGGCTCTAC CTCCCCTTCA GAGTGTGTGG ATGACCCCAG AGTTTGCTGG
CGCGGTGAAG GTTGTATTAC CCGCAATGTT TGGCTGAAGA TTAAAAAAGC CACAGATGAA
ATTCTGGATT CTATCAATTT GGAGAATTTG GTACAGCAGT GGAAAGAAAG CGGTTCACCT
GAAGTTCCTC TGGAGCTGAG CATTTAA
|
|---|
| Protein sequence | MKLSARGRHS MEAMFDLAVH YGEGPILIRD VAQRRKISEQ YLAQLFIPLR IAGLVRSVRG
ANGGFVLARD PKEIRLSDIV KATEGSTSPS ECVDDPRVCW RGEGCITRNV WLKIKKATDE
ILDSINLENL VQQWKESGSP EVPLELSI
|
|---|
| |