Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_1298 |
Symbol | |
ID | 8658223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 1193585 |
End bp | 1195783 |
Gene Length | 2199 bp |
Protein Length | 732 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003330725 |
Protein GI | 270308667 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGTA CGCCGATTAT TCTTTTCAAT ATAGATGATT TCCTAAGTCG ATTACCCGAT GCCAGAAAAG TGAGAGATAA TCACTGGGTT GCCTCATGTC CAGTGGAAGG CCATTCTACT CCTCAAAATC ACCTGTCTAT TACGGATGTT GGAGATAAGG TCTTACTAAC ATGCTTTTCG AATCGAAATC ATAGTTATCA GCAGATCTGT CAGGCACTTG GTCTTAAATC TGACTCTCAG CCAACTGAAT TTAAGCGTTG TATAGATTCT CTATACGCCT ACAAAGACAG AGATGGAAAT CTCCTCTATC AGGTAGTCAG ATACAAGCCT AAATCCTTTG CTCAAAGAAG ACCAGATGGC AGGGGTGGCT GGATCTATAA CCTTAAGGGA ATTACTCCGG TTCTCTATCG CCTACCCGAA CTATTAGCTA CGCCTCAGGA CCATGTGATT TTCATAGCCG AAGGGGAGAA GGGAGCTAAT TCTCTGGTTG AGCATGGCCT AAATGCCACC TGTTCTCCTA TGGGGGCAGG AAAGTGGAGA GAGGAATACA ATTCAGCCTT CACCAACCGT AGTTTAGTCA TCCTGCCGGA TAATGATGAA CCGGGAGAAA ACCATGCCCA ACAGGTGTTT GACTCCCTAT CAAAAGTAAC TCCCACTATT CAAATACTTC ACCTGCCAGG TTTGAGGGAA AAAGAGGATG TGTTTGATTG GTTTGCGCAA GGGCATACCG CGGAAGAACT CCTTGAATTA GTCGAATTAA TTCCTTCTCA ATCAGACCTT GACCTCGCTG TTTTGCTTGA TGACATAGCA AGTTTTATCC GGTCTTATGT CATTCTGAAC GAATATCAGC TTCAGGCTAT CTCTCTGTGG GTACTCCATA CCTATACTTT AGAAAATGCT CTTACTACTC CCTACTTGAA TATCTATTCA GCCGAGAAAA GAAGTGGTAA GACTCGCTTG CTTGAGGTAT TGGAAGTACT GGTTGCCCGT CCCTGGTTTA CCGGACGGGT AACCTCAGCC GTACTTGCCC GCAAGGTAGA TGCCGAATGC CCTACCCTTC TTCTGGATGA ATCCGATGCT GCCTTCAAAG GTGAGAAGGA ATATTCCGAA ACCCTGAGGG GCATATTAAA TACAGGATAC CGAAGGGGTG GCAAATCCTC GGTTTGCGTG GGTAAAGGCG CAGACATCTC CTATAAAGAC CTATCCACCT TCTGCCCCAA AGCAATTGCT GGCATTGGTA AGCTACCGGG CACTCTTGCT GACCGGAGCA TCCCTATCCA GCTTAAACGC CGGAATGTTA ATGAGACAGT TGCAAAATTC CATCCCCGAA AAATCACAAC CGAAATCCAG AGATTGAAAG AGAGATTAGT TCAGTGTACC TCCATTGGTT TAAGTGAGAT TGAACTTATC ATACCCTCTG AACTTGATGA CCGGGCGGCT GACTGCTGGG AACATCTCCT AATCATTGCA GAAACAGCAG GCAATTCATG GCCTGAAAAA GCCCGCATTG CGGCCATTGC TTTAATGACT GGAGAAGTTA GGCAAGACGA TTCACTTGGG ATTCAACTTC TAACTGATAT ACGGGAAATA ACTAAAGACA AAAGTGAGTG TATATCTTCT GCTGACTTAA TCGAGGCTCT CCTCAAGGTA GATGAATCTC CATGGTCAGA CCTGAATGGC AGATCTCTTA ATGCCAGAAG ACTGGCTGCT CTACTTAAAA CCTATGGCAT TCACAGCCAG ACTATAAGAG AGGGCAACCG AACTTTCAAA GGCTACCAAG TCGCTGATTT TCAAGATGCT TTTAACCGCT ATCTTTCTAA AAATGGACTT CTATCCGTAA CATCCGTAAC AGATAGCTTT GAGCCAATCG TAAAATGTGA GCCAAATTCA TCCGTAACAA ATGGTCCAAA AGAGCAAAAT GTTACGGATA ATCCTCAGAG CTATGCCAAT CGTAATGTTA CGGATGTTAC GGATAAAACC CTGTTTATCA GAGAAATAGA CAAAAATGAG CTGGATGATG AGTCCGAATC GGATACTTCC TGCGAAGTTT TAGACTCATG GAGAAAGACA GCTATTCCGG CTTGGAGACG GGTTTTAAAA GAAAGTATCA GTCAGGGGGA TATAAAACGC GAGGAATATG CAAGAAAGAT GCTTCAGGAA GTCTTAAAAG ACCCGGCCTA CCGGGAGGTC CAGCCATGA
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Protein sequence | MKSTPIILFN IDDFLSRLPD ARKVRDNHWV ASCPVEGHST PQNHLSITDV GDKVLLTCFS NRNHSYQQIC QALGLKSDSQ PTEFKRCIDS LYAYKDRDGN LLYQVVRYKP KSFAQRRPDG RGGWIYNLKG ITPVLYRLPE LLATPQDHVI FIAEGEKGAN SLVEHGLNAT CSPMGAGKWR EEYNSAFTNR SLVILPDNDE PGENHAQQVF DSLSKVTPTI QILHLPGLRE KEDVFDWFAQ GHTAEELLEL VELIPSQSDL DLAVLLDDIA SFIRSYVILN EYQLQAISLW VLHTYTLENA LTTPYLNIYS AEKRSGKTRL LEVLEVLVAR PWFTGRVTSA VLARKVDAEC PTLLLDESDA AFKGEKEYSE TLRGILNTGY RRGGKSSVCV GKGADISYKD LSTFCPKAIA GIGKLPGTLA DRSIPIQLKR RNVNETVAKF HPRKITTEIQ RLKERLVQCT SIGLSEIELI IPSELDDRAA DCWEHLLIIA ETAGNSWPEK ARIAAIALMT GEVRQDDSLG IQLLTDIREI TKDKSECISS ADLIEALLKV DESPWSDLNG RSLNARRLAA LLKTYGIHSQ TIREGNRTFK GYQVADFQDA FNRYLSKNGL LSVTSVTDSF EPIVKCEPNS SVTNGPKEQN VTDNPQSYAN RNVTDVTDKT LFIREIDKNE LDDESESDTS CEVLDSWRKT AIPAWRRVLK ESISQGDIKR EEYARKMLQE VLKDPAYREV QP
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