Gene DhcVS_1218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhcVS_1218 
Symbol 
ID8658146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. VS 
KingdomBacteria 
Replicon accessionNC_013552 
Strand
Start bp1131283 
End bp1131903 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content47% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003330658 
Protein GI270308600 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACAAAG CAGTCAAAGC GGAAACCCGC AAAATACAGG CTGAAAAACG CCGCCAGGAA 
ATACTGGACG CTGCCCTAAA GGTATTTGCC GAACAAGGCT ACCAGGGGGC AACTATCAGC
CAGATATCCG AAGCAGCTGG AACATCTCTG GGACTGCTTT ACCATTATTT TCCCAATAAA
AAGGCCCTGA TGGAGTCGGT AATAGCCGAA AATAGTTTCC TCCCCTTGTT AAAAAAAATA
CTCGGCAAAC CCGGCGACCA GAATATACAG ACTGTCCTGA CAGAATTATG CACAGGGTTT
TACCGCCTGT TGGAAGAAAA AAAGGAACTG GTGGTTGTTT TTCTACGGGA AGGAACCAGC
AATCAAACTG TCCGCCAAGT ATGGTTCGGT ATGCTTGCCC AAGGAGCTCT CTCCATTAAA
AAATTTCTTG ACCAATATGT GGAACGGGGA GTGCTGAAAA CTCACGCTAC CGACGTTTCC
GCCCGCAGCC TCATGTCAGC AATAGTAATG CTCTACCTGA CTAACGAAGC TTTCGGTGAC
GGATTTGCCA AGCCTGCTGA ATTTATAACC CAGATGGTAG CTAACCAGCT TAATGGTATA
GAAGCCCGCC AAAAAGAATA G
 
Protein sequence
MHKAVKAETR KIQAEKRRQE ILDAALKVFA EQGYQGATIS QISEAAGTSL GLLYHYFPNK 
KALMESVIAE NSFLPLLKKI LGKPGDQNIQ TVLTELCTGF YRLLEEKKEL VVVFLREGTS
NQTVRQVWFG MLAQGALSIK KFLDQYVERG VLKTHATDVS ARSLMSAIVM LYLTNEAFGD
GFAKPAEFIT QMVANQLNGI EARQKE