Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_1213 |
Symbol | hypB |
ID | 8658141 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | + |
Start bp | 1125857 |
End bp | 1126513 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | hydrogenase accessory protein HypB |
Protein accession | YP_003330653 |
Protein GI | 270308595 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0929883 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAAAG TCAAAGTTCT TAAAAATATC ACTGACATGA ATGACCAGCT GGCTGCCAGA AACAAGGATA TGTTTGCCGG AAAAGGCATA CTGGTGATAA ATGTCATGTC TTCACCCGGC GCCGGTAAAA CCAGCTTGCT TCTGAAGACT ATTGAGCTGC TGGGAGATGA TACCCGGGTG GGTGTGATAG AGGGTGATAT AGCCTCAAGC GTAGATGCCG AAAAAATAGC CGCCACCGGT TCGCAGGCTA TTCAGATAAA TACAGACGGG GGCTGCCATT TGGATGCCAA TATGGTAGCC TCAGCCGCAG ACGGGCTGGA ACTGGACAAG CTGGATATTA TTTTTATTGA AAACGTGGGC AATCTGGTCT GCCCGGCCGG TTTCCAGCTG GGTGAGGCCA AAAGGGTAGT GCTGGCATCC GTGCCGGAGG GTGATGACAA ACCCACCAAA TACCCCTTTA TGTTCCAGGA TACAGACGTA ATAGTCATAA CCAAAATGGA TTACCTGCCG CTTAGCGATT TTAATATGGA ATCTTTCCGC AAAACAGTGA CGGGTCTAAA CCCGGACGTA AAAATAATTG AGCTTTCAGT AAGGAATGGC CAGGGGCTGG ACGAATGGAT ATCCTGGCTG AAAAGCAACC TCCTTAAGAG AAAATAA
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Protein sequence | MMKVKVLKNI TDMNDQLAAR NKDMFAGKGI LVINVMSSPG AGKTSLLLKT IELLGDDTRV GVIEGDIASS VDAEKIAATG SQAIQINTDG GCHLDANMVA SAADGLELDK LDIIFIENVG NLVCPAGFQL GEAKRVVLAS VPEGDDKPTK YPFMFQDTDV IVITKMDYLP LSDFNMESFR KTVTGLNPDV KIIELSVRNG QGLDEWISWL KSNLLKRK
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