| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_1164 |
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| Symbol | nadB |
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| ID | 8658092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. VS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013552 |
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| Strand | - |
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| Start bp | 1074041 |
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| End bp | 1075588 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | aspartate oxidase |
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| Protein accession | YP_003330605 |
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| Protein GI | 270308547 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000105405 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGTTCCA GCTACGACTA TATAATTATT GGCAGCGGTA TTGCCGGTTT ATATACCGCT
TTGCTGGCGC GTGGGCGGGG AAGTGTTTTG CTGGTCACCA AGGGCAAGAT ACAAGACTGC
AATACCCGCC ATGCTCAGGG CGGCATAGCC GCCGCCATCG GCCCGGATGA TTCTCCACGT
TTGCATTTTG AAGATACCCT GATAGCCGGA GATGGTTTGT GTGACCGTGA GATGGTGCGC
TTGCTGGCTG AAGAAGCCCC CCAGCGTATT GCCGAGCTAG TTTATCTGGG AGTGCCTTTT
GATAGTGTAA ATGGCGAAAT ATCTCTTACG CTGGAAGCTG CCCACAGCCG CCCCCGTATC
CTTCATGCCG GGGGAGACGC CACCGGTAAA CACATTGAAA TTACCCTGAA CAACTGGGTG
CGCACTACCC AGATTGAGGT TTTGGAAGAT ACTCTGGCCA AAGAGCTGAT TGTGGAAAAC
GGCCGTATCA AGGGTGTGGC AACACTGGAT ACCAATACCG GTGCCATACA GCACTACCAG
TGCCGTTTTG TAATACTGGC AACCGGCGGT GCAGGACAGC TTTTCAGCTT TACCACCAAC
CCGGAAGTTG CCACCGCAGA TGGGGTAGCT TTGGCTTTTC GGGCAGGGGC AGAAATAAAG
GACATGGAGT TTTACCAGTT TCACCCTACT GCCATTCACC TGCCTGGGGT TGCCCCGTTT
CTTATTTCCG AGGCAGTCAG AGGTGAAGGC GGAATTTTAC GGAATATAGA AGGCAAACGT
TTTATGCCAG AATATTCCCC CCAGTCCGAA CTTGCCCCAA GAGATGTGGT AGCCCGCAGT
ATTCACCTTG AAATGCTTAA AACCAAATCT GACCACGTTT ATCTGGATGT AACTCACCTG
CCTTCCCACA AAGTAAGCAG CCGCTTCCCC CAGATATACC GTTTTTGTCT GGACCATGGA
CTGGATATTA CCCGTGAGGC TATACCTGTT TCCCCGGCTG CCCATTACAT GATAGGCGGG
GTAAAGGTGA ATAGCTGGGG AGAAACCAAT ATCAAGGGGC TTTTTGCCTG CGGCGAAGTA
GCTTGTACCG GTGTTCACGG GGCAAACCGG TTGGCTTCAA ATTCGCTTTT GGAAGTATTG
GTTTTCGGGA GGCGGATTAT AGAATATAGT GCAGGTGAAA ACCAGCCTGA AATGCTGGCA
CCTATTCCCC AACTGACCAA ACGCCTGCTG GGGTGGGGGA AATATGTACG TAATCTGCCT
GAACCTTCTA TACCGGCACT CCAGGAGCTT CTCTGGGAAG ACTCTGGTAT AATAAGAAGC
TATGCCGGTT TGGCGAAAGC TCAGGAGATT CTTTCAGGCT GGCAATACAG TCTGGGTGAC
GTTTCCAATC GCAAAGGAAT AGAGCTGGCA AACCTTATTC TGGCTGGAAG GCTTATGGTA
GAATCAGCCC TGCTCAGACA GGAGAGCCGC GGAGCGCATT ACCGTACAGA TTTTCCCGAC
CACCAGCCTG AGTGGGAAAA ACATATAGTC TTTATTAAGG AGGATTAA
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| Protein sequence | MSSSYDYIII GSGIAGLYTA LLARGRGSVL LVTKGKIQDC NTRHAQGGIA AAIGPDDSPR
LHFEDTLIAG DGLCDREMVR LLAEEAPQRI AELVYLGVPF DSVNGEISLT LEAAHSRPRI
LHAGGDATGK HIEITLNNWV RTTQIEVLED TLAKELIVEN GRIKGVATLD TNTGAIQHYQ
CRFVILATGG AGQLFSFTTN PEVATADGVA LAFRAGAEIK DMEFYQFHPT AIHLPGVAPF
LISEAVRGEG GILRNIEGKR FMPEYSPQSE LAPRDVVARS IHLEMLKTKS DHVYLDVTHL
PSHKVSSRFP QIYRFCLDHG LDITREAIPV SPAAHYMIGG VKVNSWGETN IKGLFACGEV
ACTGVHGANR LASNSLLEVL VFGRRIIEYS AGENQPEMLA PIPQLTKRLL GWGKYVRNLP
EPSIPALQEL LWEDSGIIRS YAGLAKAQEI LSGWQYSLGD VSNRKGIELA NLILAGRLMV
ESALLRQESR GAHYRTDFPD HQPEWEKHIV FIKED
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