Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_1155 |
Symbol | lspA |
ID | 8658084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | + |
Start bp | 1065891 |
End bp | 1066373 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | lipoprotein signal peptidase II |
Protein accession | YP_003330597 |
Protein GI | 270308539 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0136608 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAGGG GATTTGTGTT TTTTGTCAGC GCCGCTTGCG GCATTCTGGC TGACCAGTTT AGCAAATTTA TTATTACCGC TAACCTTACC GCAGGCACAG CCATACCGGA AAATAGTTTT TTCCAGATTG TCCACGTGCA TAACACCGGT GCGGCCTTCA GTATTTTCCG GGGACATATA GAGTGGCTTA TTGCCGCCAG TTGCCTGGGA GTAATACTGG TCATGACCGC TTTTTTTATC AGGAAAAAGC TGCCATTTTT AGATACCCGC CCCGGTTTAG CTGCTTTAGG AATTATTCTG GCAGGTACAA TAGGTAACCT GATTGACCGG GTGCGGCTGG GTTATGTTAC TGATTTTATA CAGGTAGGGG ATTTCCCTAC TTTCAATATC GCTGATTCGT GTCTGACAGT AGGCGTTATC TGGCTGGTGC TTTTATACCT TACATCTTCC AGTTCGGGAG GAGATGCCAG TGAAAACGCG TAG
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Protein sequence | MTRGFVFFVS AACGILADQF SKFIITANLT AGTAIPENSF FQIVHVHNTG AAFSIFRGHI EWLIAASCLG VILVMTAFFI RKKLPFLDTR PGLAALGIIL AGTIGNLIDR VRLGYVTDFI QVGDFPTFNI ADSCLTVGVI WLVLLYLTSS SSGGDASENA
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