| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_1141 |
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| Symbol | pilT3 |
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| ID | 8658070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. VS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013552 |
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| Strand | + |
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| Start bp | 1053728 |
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| End bp | 1054843 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | Tfp pilus assembly protein pilus retraction ATPase |
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| Protein accession | YP_003330583 |
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| Protein GI | 270308525 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000163324 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGTTA TAAAACTAGT CTACGAAGCC GAAGAGAAAA AAGGCTCAGA CCTGCATCTG
GTAGCCCAAA GCCCGCCGCT GGTCAGGGTA CGGGGAGACC TTGAAGCCCT AAACTCCCAT
GAACAGCTGC AACCGGCAGA TATCAAAGCA GCTTTTGAGC AGCTGACTAC CCATGAAGAA
CGGGAATCTT TTTACAAGGA ATGGGAGTTG GATTTCGGCT ACTCGCTTGA TGGTGTGGGA
CGGCTAAGGT GCAATGCCGC TATGCAAAGG GGAGCTATCA GTCTGGCTAT ACGCCTGCTT
CCGCCCAATA TACCCACTAT CAGTGAACTG GAATTGCCGG ATATATGCGA GAAACTGATA
ACCAAACCCC GGGGTTTGGT TATTGTGACC GGCCCCACCG GCAGCGGTAA AAGCACTACC
CTGGCCGCCA TGATACAGCA CCTGAACAAT ACCGAAAATA AACATGTGGT GACTATTGAA
GACCCTATTG AGTATGTTCA CCCATGTATA AAATGCGCCG TTACCCAGCG TCAGCTTGGT
TCAGATACAC TTTCCTTCGG CCACGCCCTG AAGCATGTAC TCCGCCAGAA CCCTGACGTG
ATAATGGTGG GGGAGATGCG TGACCTGGAT ACAGCCGCTG CTGTGCTGAC AATTGCGGAA
ACAGGCCATC TGGTACTCTC CACCTCCCAC GCACCCAGTG CTTATCAGGC TCTGGAACGG
ATTATAGACC TGTTCCCGCC CCATGAAAGG CATCTGGCCC AGACCCGTCT GGCTTCGCTT
ATTGAGGGTG TTCTCTGCCA GACTCTGGTA CCCCGTGCTA ATACTAACGG ACGGGTAGTG
GCAGTGGAAA TAATGCTGGG AAGCCCGGCA GTCAGAAACC TTATCCGCGA AGGCAAGTTT
TACCAACTGC CGAATGTTAT CCGCACCAGC CATGATGAGG GCATGATAAC CATGGACGAG
GCCCTGGTGG AGCTTTACCG CCAGCAGGTA ATCAGCCGTG AAAACCTGTT TAACTACTGT
CAGGATGCGG CCGAGGTGGA AAAGCTGATA AGCAGCAGCT CAAGCAGCCA GAAACGCAGA
AAAATAGTTG AGAGCGGCAA GAGTCTGCTC TTCTAG
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| Protein sequence | MDVIKLVYEA EEKKGSDLHL VAQSPPLVRV RGDLEALNSH EQLQPADIKA AFEQLTTHEE
RESFYKEWEL DFGYSLDGVG RLRCNAAMQR GAISLAIRLL PPNIPTISEL ELPDICEKLI
TKPRGLVIVT GPTGSGKSTT LAAMIQHLNN TENKHVVTIE DPIEYVHPCI KCAVTQRQLG
SDTLSFGHAL KHVLRQNPDV IMVGEMRDLD TAAAVLTIAE TGHLVLSTSH APSAYQALER
IIDLFPPHER HLAQTRLASL IEGVLCQTLV PRANTNGRVV AVEIMLGSPA VRNLIREGKF
YQLPNVIRTS HDEGMITMDE ALVELYRQQV ISRENLFNYC QDAAEVEKLI SSSSSSQKRR
KIVESGKSLL F
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