Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_1138 |
Symbol | |
ID | 8658067 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | + |
Start bp | 1050047 |
End bp | 1051663 |
Gene Length | 1617 bp |
Protein Length | 538 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003330580 |
Protein GI | 270308522 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000071313 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGTGATA TTAAAAAACT CATCAGGGGC GAAAAAGGGG CTTCATTAGC TGTTGCCCTC ATCTTTTTGG CAATAGGTGC CATCATGATT CCTCCCCTGC TGATGCTTGT AGGTTCAGGT CTCAAACAGG GTGCTGCTAT TGAAAACCGG ACTGATGTTT TGTATTCTTC GGATGCCGGA GTGGAATGGG TTATAAATAT ACTCAAGACC GGTAGTGAAG GAGTAACGGA CTCTCACGGT AATATCGGTC TGCCAAACCC CCAAAGCCCT ACCCGTACTT ATAACATGTC TGATTTAAAC GGCAGCGCCG TCATGGTAAC CCTGACGTAC CATGACTTAG GCAGCTATTA TGACGTAGTC TCAACAGCCA GTCTGAATGG AAGGTCTATT ACTACAAACG CTACCTTAAG ATACCAGATG AGCGGCGGTA GTGTATTTGA TAACGCCATT ACCTCACTTG ACGGTGATGT AAAACTTACC GGTTCTTCCA GTGTAATTTC AGACCCGCGG AATCCCCCCG GTGCTATAGT TTATTCCGGA GGAGAACTTA TATTAACCGG TTCATCTTTT ATTGAAGGCA ATGTTTATGC TGACGACGGT ATTGAACTTG GCTGGTCAAC CCCCATAACC GGTGATGCTG TTACGCCTGC CAGCGTAAAC CGCCCCGGCA ATATAAGCGG TACAGTCACA ACCGGCGCGG CTCCCCAGTT ACCGAGCATA TTAACAGATG CTGAAATAGC CGCCATTGTG TCAGATATCC AGAATGAAAC GGCGTTTACA GCCTTTAGCC CCGGTCCGGT TACCCGGGCT GACAACAAGG GAGACTGGAG TATAGGCTAC TGGCCTGTAC CAGCCTCAAT CTATTATACC GCTGAACGTA TCCAACGGGA TTTGAATATC TCTACAGATA CCCCCTTAAC CTTCAAGTCC AGTGTATATA TAGGGCGTGA TTTCAACCAT AACAATTCCA CCACAGTAAT TTTTGAGGGG CCGGTAGTTA TACTGGGTAA TCTCAAAGTA GTAGGCAGCG GCCATATCAT CTTCAAAAGC TCCGTCTGGG TGGGCGGAAA CATAGACTTG GGCGGCAATG TAAGCGTAGA ATTCCAAGGG AAAGTATACA CAGGCGGTGA TTGCAAGCTG GCATCCGGCG GCACAGTCCC GTTCGGTGAC ACCCTGTATG TTGCAGGTGA CCTTAAAACA ACCGGCAGCC GTGAAGTTGA ACTTGGCGGC AGTATATTTG TCGGCGGAGA CCTTGACCTT GCCGGCAGTT CACAGATGGT TGGAGCTGAA ACAGTAATAG TGCTGGGAGA TATAGACCTT ACGGGCAGTA CTAAACTTAC CGATGTAAAT GACATACCCT TTATCCTGTC TCCCACCGGT GATTTTGATA TGAGCGGCTC TTCATGGGTA TCTGCTGTCG TGTATGCCCC GCAGGCTGAT GTCAGCCTGA ATGGCGGTGT AAACCTGTAC GGTGCAGTGG TAAGTAACAG CTTAACTGTT ACCGGCAGTT CACAGATACA ATACCCCACA TCTCTTTCAA CCCGAACTGA CTTACCGGGC GGAGGAACTT CCAATGCTGT TCTGGAAATA CTCGCATGGA ATACACTCGG CGGTTAA
|
Protein sequence | MGDIKKLIRG EKGASLAVAL IFLAIGAIMI PPLLMLVGSG LKQGAAIENR TDVLYSSDAG VEWVINILKT GSEGVTDSHG NIGLPNPQSP TRTYNMSDLN GSAVMVTLTY HDLGSYYDVV STASLNGRSI TTNATLRYQM SGGSVFDNAI TSLDGDVKLT GSSSVISDPR NPPGAIVYSG GELILTGSSF IEGNVYADDG IELGWSTPIT GDAVTPASVN RPGNISGTVT TGAAPQLPSI LTDAEIAAIV SDIQNETAFT AFSPGPVTRA DNKGDWSIGY WPVPASIYYT AERIQRDLNI STDTPLTFKS SVYIGRDFNH NNSTTVIFEG PVVILGNLKV VGSGHIIFKS SVWVGGNIDL GGNVSVEFQG KVYTGGDCKL ASGGTVPFGD TLYVAGDLKT TGSREVELGG SIFVGGDLDL AGSSQMVGAE TVIVLGDIDL TGSTKLTDVN DIPFILSPTG DFDMSGSSWV SAVVYAPQAD VSLNGGVNLY GAVVSNSLTV TGSSQIQYPT SLSTRTDLPG GGTSNAVLEI LAWNTLGG
|
| |