Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_1106 |
Symbol | |
ID | 8658036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 1025582 |
End bp | 1026490 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | NADH dehydrogenase-like protein |
Protein accession | YP_003330549 |
Protein GI | 270308491 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0798797 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAACA GAGTATTTGT CACTGGCGGC AGCGGGTTTG TGGGCGGGCA TTTGCTGCCC AGATTGGCTG AAAACGGCTT TAAAATTCGT CTGCTGGTTA TGAATGAAAC CGAGGCCAAG CGGGTAAAAA CCCCCGGAGT GGAGTTTGTG TACGGTACGG TTAATGACCT GCCGGTGCTT ATGGAGAGTA TGAAGGGTGT TTTTGCCGTC ATACATCTGG TGGCTATACT GCGTGAAAAT AAAAATGCTA CCTTTGAGAA GGTAAATATA GAAGGCACAA AGAATATGCT GGCGGCCGCT GCTGAAAACG GGGTAAAAAG GTTTATCCAT ATGGGGATAC TGGGTGCCAG CGCGGACCCC AGTTTTACCT ACCTCCATTC CAAGTATCTG GCTGAAGAAG CGGTCAGCAA ATCAGGTCTG GATTACAGTA TTTTAAAGCC TTCGGTCATG TTCGGACAGG GAGCCGGGTT TATAAATGCC CTTATCCGTT CATTTAAGCC CTATCCCTTA CTTGCCCCAG TTGCCGGAAA CGGGGAAACC CGCCTGCAGC CTGTCTGGGT GGAGGACGTG GTCAGCTGCC TGCTGAAAAT GCTGGACGGT GAAAAGATAC ATCAGAGCGT ACAGATTGGC GGACCCCAGA TATTTACTTA TGACGAGGTT CTTTCGGCGG TGATGCAGGC TATGGGGGTA AAAAAGCCCC GGATGCATGT GCCTGTGAGT TTGATGCATC CGCTAGTTTG GCTGATGGAA CGCACCAGTT CCAACCCGCC TATTACTCTG CCGGAGTTGA AAGCTTTGTC AGTAGACAAC ATAACTGCAG AAAATGCTAT AAAGAGAGAG TTTGGTTTTG ACCCCAAGCC TCTTTCGGAA GGGCTTGATT ACCTTAAGAC AGCTCCAGTC GTTCCTTAG
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Protein sequence | MTNRVFVTGG SGFVGGHLLP RLAENGFKIR LLVMNETEAK RVKTPGVEFV YGTVNDLPVL MESMKGVFAV IHLVAILREN KNATFEKVNI EGTKNMLAAA AENGVKRFIH MGILGASADP SFTYLHSKYL AEEAVSKSGL DYSILKPSVM FGQGAGFINA LIRSFKPYPL LAPVAGNGET RLQPVWVEDV VSCLLKMLDG EKIHQSVQIG GPQIFTYDEV LSAVMQAMGV KKPRMHVPVS LMHPLVWLME RTSSNPPITL PELKALSVDN ITAENAIKRE FGFDPKPLSE GLDYLKTAPV VP
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