Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_1090 |
Symbol | |
ID | 8658021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 1013278 |
End bp | 1014105 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | hydrolase, alpha/beta fold family |
Protein accession | YP_003330535 |
Protein GI | 270308477 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGCTG AAAATGAATT TGCACCTCAG ATAGCCCGTT TGCCGGGGGT AGATTTATCA TATAGGGAGG CGGGTACCGG CAAGACACTG GTATTTATGC ATGCCGGCAT TACGGACAGC CGTTCCTGGC ATAATCAGCT CAGCGAATTT GCCAAAGACT ACCATGTAAT CGCACCGGAT ATGCGCGGTT ACGGGCAGAG CGTTATTACC GATGATATTT TTAATTACTA CCGTGATGTG CTGGAACTGC TGCATCTTTT GCGTGTAGAC AAAGCGGTGC TGGTGGGCAA TTCGGTGGGT GGTACGTACG CTCTGGATTT GGCTCTTTTC CATCCTGATA TGGTTTCCGC TCTGGTGCTG GTAGACCCGT ATATGCGCGG TTACCGCAAT ACAGATGAAA AATTTTTAGA CCTTGATCGC CAGCTGGAAG AGCTGATTTC GCTTGGACAG AAGACCAAAG CCATAGAGCT TTATTTACAA ATTTGGCTGG TTGGTAACGG CCGGACAAAC GCAGATATAG ACAAGGGTGT CTGCCGGTTG TGTAATAAAA TGCTGGAAGA AAACTATCAG GCAGTAATTG GCGGTAAACG GGAACAAAGG TTAAAGCGCC CTCAGGCCGA AGATTACCTG AGCCTTAAAA TACCTACGCT GGTACTGGTA GGCGAACATG ATGTTCCTGA TATGCATGTT ATCGGGGAAC GTTTCAGCCA GGCAATCCCG CGGGCCTCTT TTCAGGAAAT AAAACAGGCC GGGCATTTGC CTGCTTTGGA AAAACCATCG GCGTTTAACG GCCTGCTTCG TGGTTTTTTA CAGCAAAACG GCCTTTAG
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Protein sequence | MTAENEFAPQ IARLPGVDLS YREAGTGKTL VFMHAGITDS RSWHNQLSEF AKDYHVIAPD MRGYGQSVIT DDIFNYYRDV LELLHLLRVD KAVLVGNSVG GTYALDLALF HPDMVSALVL VDPYMRGYRN TDEKFLDLDR QLEELISLGQ KTKAIELYLQ IWLVGNGRTN ADIDKGVCRL CNKMLEENYQ AVIGGKREQR LKRPQAEDYL SLKIPTLVLV GEHDVPDMHV IGERFSQAIP RASFQEIKQA GHLPALEKPS AFNGLLRGFL QQNGL
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