Gene DhcVS_1081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhcVS_1081 
SymboltypA 
ID8658012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. VS 
KingdomBacteria 
Replicon accessionNC_013552 
Strand
Start bp1005259 
End bp1007127 
Gene Length1869 bp 
Protein Length622 aa 
Translation table11 
GC content48% 
IMG OID 
ProductGTP-binding protein 
Protein accessionYP_003330526 
Protein GI270308468 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00893132 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTGCCCTT GTATCCAGGC TATTTTCAGG AGAAAGATTT TGGAAAACTA CCAGAGAACA 
GATATCCGTA ATATTGCCAT TATTGCTCAC GTAGACCACG GCAAAACCAG CCTGGTGGAC
GTGATGCTTA AACAAAGCCG TATTTTCCGT GAAAACCAGC ATGTTGGCGA ACTTATCATG
GACCGCAATA CTCTGGAACG GGAAAAAGGA ATTACTATCC TGGCAAAAAA CACAGCCATA
ACCTACCGCG GAGTAAAAAT AAACATTATC GATACCCCTG GACATGCTGA TTTTTCGGGT
GAAGTTGAGC GGGTGCTGAA CATGGCTGAC GGCTGTCTTT TGGTAATTGA CAGCATTGAC
GGCCCTATGC CCCAAACCCG TTTTGTGCTT AGGGAAGCCA TGCAGAAAAA GCTGAAGCCT
ATCGTAGTTA TAAACAAGAT AGACCGCGAA AATGCCCGCC CTGAAATAGT GCTGGGGCTG
GTACAGGACT TGTTTCTGGA ACTGGCTACC ACTGAGGAAC AACTGGACTT CCCGGTAGTT
TATACTTCTG CCCGCGAGGG TTATGCTGTA AATACCCCCG GTACCAAAAG CACTGATCTT
ATCCCCCTGT TTGAGTGCAT ACTTGCCAAA ATCCCCCCTC CCAGCATTGC CCAAGGGGAA
TTCCAGATGC TGATTTCTAA CCTGGACTAT GATACCCACA AAGGACGGAT AGCTATCGGA
CGTATCCAAC GGGGCAAAAT ATGTTCCCAT GACCGGGTTG TTAATATAGA TTCCCAAAAT
AAAGCCCATT CTTTTGAAGT AGGTCAGGTA TTTACCTTTA TGGGACTGGG CAAACAGGAA
GTGGAATGTG CCGAAGCGGG TGAAATAGTA GCCATTACCG GTCTGGAAAA CGCATCTATA
GGGGATACTG TCGCCAGCCC TCTTCAACCC GAAGCCCTGC CCCGCATTGA AATAGGTGAA
CCTACTGTCC GCATGACTTT CGGGGTAAAC ACATCACCCT TCGGTGGACG GGATGGCAAA
TACTGCACCT CACGCCAGCT TCGGGAAAGA CTTTTCCGCG AGCTTGAGAC CAATATAGGG
TTGAGGGTTG AAGAAACCGA TTCACCGGAC TCATTTTTGA TTTCCGGACG GGGCGAACTC
CACCTGTCTA TACTGGTGGA AACTATGCGC CGTGAAGGAT ATGAGTTTGA AATATCCAAA
CCGGAAGCTA TTACCAAGAA TATTAACGGC AAAGTCTATG AACCGGTAGA AGCTTTGACG
ATAGATGTCC GCGAGGATTT TGTAGGAGAG GTCACCGAGC TTCTGGGTAA ACGGCAGGCA
CGTATGACCG ATATGCACAA TGACGGGGAA GGAAACGTAA GGCTGGAATA CAATATACCT
ACCCGCGGCC TTATCGGCTT CCGCAACTCT TTCCTGACAG CCACCAGAGG CACGGGCGTA
CTGAACAGCC AGTTTCTGGA TTTTCAACCC TGGTGCGGTG AAATAGAACA AAGCCGGACC
GGCGCTTTGG TAGCAGCCGA AGCAGGTTTA TCCTGCACTT ACGGGCTTAA CAACTCACAG
GAACGTGGCA TACTGATGAT AGACCCCAAC ATACCCGTTT ACGAGGGTAT GATAGTCGGT
CTTCATGCCA GAGGGCTTGA CCTGGCGGTA AATGTCTGCA AACAAAAGAA GATGACCAAT
ATCCGTTCGT CTACCTCGGA CATTGCCATA AAGCTGGTAC CGCCTATGAA ACTAAGTCTT
GAACAGTCTA TGGATTTTAT CGCTGATGAC GAACTGGTTG AGGTAACTCC CAAGGGTATC
CGCCTGCGGA AAAAGATACT GGATACCGAG ATGCGGCTTC GGGCACGCAA ACGCACTGAA
AATAATTAA
 
Protein sequence
MCPCIQAIFR RKILENYQRT DIRNIAIIAH VDHGKTSLVD VMLKQSRIFR ENQHVGELIM 
DRNTLEREKG ITILAKNTAI TYRGVKINII DTPGHADFSG EVERVLNMAD GCLLVIDSID
GPMPQTRFVL REAMQKKLKP IVVINKIDRE NARPEIVLGL VQDLFLELAT TEEQLDFPVV
YTSAREGYAV NTPGTKSTDL IPLFECILAK IPPPSIAQGE FQMLISNLDY DTHKGRIAIG
RIQRGKICSH DRVVNIDSQN KAHSFEVGQV FTFMGLGKQE VECAEAGEIV AITGLENASI
GDTVASPLQP EALPRIEIGE PTVRMTFGVN TSPFGGRDGK YCTSRQLRER LFRELETNIG
LRVEETDSPD SFLISGRGEL HLSILVETMR REGYEFEISK PEAITKNING KVYEPVEALT
IDVREDFVGE VTELLGKRQA RMTDMHNDGE GNVRLEYNIP TRGLIGFRNS FLTATRGTGV
LNSQFLDFQP WCGEIEQSRT GALVAAEAGL SCTYGLNNSQ ERGILMIDPN IPVYEGMIVG
LHARGLDLAV NVCKQKKMTN IRSSTSDIAI KLVPPMKLSL EQSMDFIADD ELVEVTPKGI
RLRKKILDTE MRLRARKRTE NN