Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_104 |
Symbol | rdhA |
ID | 8657058 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 97423 |
End bp | 98994 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | reductive dehalogenase |
Protein accession | YP_003329605 |
Protein GI | 270307547 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCATA TCCGCAGCCG CTTTTCAAAA CCGGCAGATG AACTGGTGGT CAGATATACC ACCTCTTTAC CGTTTGACTG GCGTTTATAC AAGGAAGATA TAAAATGCTC AACCGCCCAT GCCCGCATGC TGGGTAAGCA GGGCATTATC TCCGCTGAGG ACAGCCAGTC CATCGTAAAC GGGCTTTCTG ATATCCTCAC CGAGATTGAA ACCGGCAGTT TTGTGTTTAA ACCCGAAATG GAAGATATTC ACATGGCCAT AGAGGGGCGG CTTTTTGAAC TTATCGGCGA GGCGGCCGGC AGATTGCACA CCGCCCGCAG CCGGAATGAC CAGGTAGCTA CCGATGTACA CCTGTTTGTA AAAAACACCT GTACCAGTAC TATCAATAAA ATACGCACCC TTCAGGGGGC TTTACTGAAA CAGGCGGAAG CCCACCAGCA AACCGCTTTG CCCGGTTATA CCCATCTACA GGTGGCTCAA CCGGTGCTTC TTTCGCACCA CCTGCTGGCT TACTTTGAGA TGCTGGAGCG GGACTGCGGG CGTTTTACAG ATATGCAAAA ACGCTCAGAT GTGATGCCTC TGGGCAGCGG GGCTTTGGCT GGCGTACCTT ATCCGCTTGA CCGCGAGATG GTAGCCAAAG AACTGGGTTT TACGGCTATC AGCCAGAACT CGCTGGATGC TGTTTCAGAG CGGGACTTTG TACTGGAATA CCTTTCAGAC GCCGCCATCT GCCAGATGCA CCTCTCCAGA CTGAGTGAGG AAATGGTGAT ATGGTCTTCG GCTGAATATG CCTTTGTAGA GCTTGATGAT GCCTATACCA CCGGCTCAAG CATTATGCCC CAGAAGAAAA ACCCTGATGT GGCTGAGCTT TGCCGCGGCA AGACCGGGCG GGTATACGGC TCTCTAAATA CCATGCTGAC TATCATGAAG GGACTGCCGC TGTCATACAA CCGTGACCTT CAGGAAGATA AAGAACCTCT GTTTGACTGC GTGGATACCC TGGGTGACAG CCTTGAGGTA TTTGCAGGCA TGATAAAAAC CGCCACGTTT AAACCTGAAC GCATGCTCCG TGCTTTGGAA AAAGGGTATG TGCTGGCAAC TGATATTGCT GATTATCTGG TGGGTAAAGG TGAAAGTTTC CGTAATTCAC ACGGCATTGT AGCCCGTCTG GTGAGCTACG CTATTTCCCA AAATAAAACC TTTGGCAAAC TGAGCCTTGA AGAATACCGC CAATTTTCAA ACCTTTTTGA CAAAGATATT TATACAGTAG ATATAAAGTC TGCTTTAAAC GCCCGCAACC TGACCGGCGG AACTGCACCA AAACAAATAG CCCAGGCAAT TGCCCGGGCT AAGAAAATAC TGGCAGAAGC TGGAGCTAAA AACTAA
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Protein sequence | MANFHSVINR RDFMKALGLV GAGAGAAAAV APVFRDLDDV VASPTATFPR AWWIKERDLW NITTEYDWKA MSRHDTCETM WIKHSWAKYV GVDKVKEAAA SAAAIKKEAL ETGKPGMDLR ASALGSTSGL YNAPQPYFSY VKTAQGWGGG KSLTGQSTIK GPDVLGVPKW QGDPDSNLRM LRAALRFYGA AQIGVVPYDT NVKNKLTCVR EGGMASMSDK YIEKWPIPAV DARPWVFEDV EKGYETAEKL VIPDKKELFV VSVIQPMSRE MWRQGSGNLR VATNGHRYSL ASVWQTKIQG FLTTLGYQGL GYPTRAYGPM PTIPGFLFSG LGELGRSNNV CLSPEYGSTH GSFHFLTDLP LTPTKPIDAG MWRFCKTCAI CAENCPSQSI SYDKEPSWEI TPSKYAPNVP VEYSVPGKKV FWRDEPSCKQ WTESCGYSCG ICMGSCVFNV DNASMIHQVV KGTIATTSLF NGFMKQADKF FGYGLTPESE WNNWWDMNLP AYAFDTTVGV TDGGYKSKGL LQQ
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