Gene Xcel_3288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXcel_3288 
Symbol 
ID8650844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylanimonas cellulosilytica DSM 15894 
KingdomBacteria 
Replicon accessionNC_013530 
Strand
Start bp3651647 
End bp3652159 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content74% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003327846 
Protein GI269958057 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTCGCG AGCACCCCGA CGACGCCGTC CTCGCGGCCG TCCACGGCAC CCACGCCGCG 
GCGCTGCACC GCTACGTGCG CCACCTGACC TCCGACGAGG AGCAGACCCG GGACGTGGTG
CAGGAGACGC TGCTGCGGGC CTGGCGGCAC CCCGAGGTGC TCGAACGCCC CGAGGACTCG
GTGCGCGCCT GGCTGTTCAC CGTCGCCAAG CACTTGGTCG TCGACCAGCG CCGCAGCGCC
CGGCATGCCC ACGAGCGCAC CACCGCCGTC GTGCCCGAAC GCCCCGAGCC CGACCGGACG
CAGCAGGTGC TCGACGCCTG GCTCGTCGCA GACGCCCTCG CCGGGCTCAG CGCCGAGCAC
CGCGCCGTCG TCGTCGGCGC CTACTACGGC GGACGGTCCG TCGCGGAGCT CGCCGACGAC
CTCGAGATCC CGCCCGGGAC CGTCAAGTCC CGCATGCACT ACGCGCTGCG CGCGCTGCGG
CTCTCGCTCC AGGAGAAGGG GGTGACGCCA TGA
 
Protein sequence
MPREHPDDAV LAAVHGTHAA ALHRYVRHLT SDEEQTRDVV QETLLRAWRH PEVLERPEDS 
VRAWLFTVAK HLVVDQRRSA RHAHERTTAV VPERPEPDRT QQVLDAWLVA DALAGLSAEH
RAVVVGAYYG GRSVAELADD LEIPPGTVKS RMHYALRALR LSLQEKGVTP