| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_3149 |
|---|
| Symbol | |
|---|
| ID | 8650702 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | - |
|---|
| Start bp | 3487368 |
|---|
| End bp | 3489131 |
|---|
| Gene Length | 1764 bp |
|---|
| Protein Length | 587 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003327708 |
|---|
| Protein GI | 269957919 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGAC CCGCCCTGGC CGAGCCTGTC GGGACTCCCG CTCTGCGGGT CGACGACCTG
ACCGTCCGGA CGGCCGGCGG TCGCACCCTG GTCTCGGGCG TCTCGCTGCA GGTGGCCGCC
GGCGAACGCG TCGGCCTCAT CGGCGAGTCC GGGTCCGGCA AGTCGCTCAC GGCGTTGTCC
GTGCTCGGCC TGCTGCCCGA CAACCTCGTC GCCACGGGCC GCGTCGACGT CGCGGGCGAG
CACGACCTGC TCGCCCGCTC CGACCGCCGC CTCGCCCCGC TGCGCGGCTC GCTCGTGTCG
ATGGTGTTCC AAGAACCGAT GACGGCCCTG AACCCGCTGC TCCGGGTGGG CCGCCAGGTG
GCCGAGGTCA TCACGCTGCA CCCGTCCACG CTGCACACGT CGCGCCGCCG GGGCGATGCG
CGGGCGCGGG CCGTCGAGCT GCTCGGGGAG GTCGGGCTGC CCGACCCTGC GGCCGCCGCG
CGCGCCTACC CGCACCAGCT CAGCGGCGGC CAGCGGCAGC GGGTCATGAT CGCGATGGCG
CTGGCCAACG ACCCGGCGCT GCTCGTCGCC GACGAACCGA CGACGGCGCT CGACGTCACC
GTCCAGGCCC AGGTGCTCGA GCTCATGGGC CGCCTGGTGG CCCGCCGCGG CACCGGCCTG
CTGTTCATCA CCCACGACCT CGCCGTGGTG TCGCAGGTGT GCGAACGCGT CGTGGTGATG
AAGGACGGCG CCGTCGTGGA GCAGGGCCCG GTCGCGGAGG TGTTCGCGAA CCCCCGCCAC
GACTACACGC GAACCCTCCT CGCGGCCTCG ATCCTCCCGC CCCGCCCTGC GGTGGTTGAG
CCCCGCCCCC CGGTGGTTGA GCCTGTCGAA ACCACCTCAA CCACCGGGAG GCCCGCGATC
CGGCTGCGCG ACGTCACGAA GCGGTTCCAC CGATCCGGTG GCGTCGTCGT CGACGCGCTC
CGAGGCATCT CGTTCGAGGT CGCTCCCGGC GAACGGTTCG GCCTGGTGGG CGAGTCCGGC
TCCGGCAAGA CGACGACGCT GCGGCTGCTC GCCGCCCTCG ACACCCCGAC GTCGGGCACG
GTCGAGGTCG CGGGGGTGAC CCTGGCGGCC CTCCCCCCGA CGAGCGTCCC GGAAGATCGG
CCAAGAGGGT CCGGAACCCG ACCAACCGGG ACGTTCGGCG GACGCGCCCG TGCCCGTGAC
GTCGCGCGCG TGCGCAGCGA CCTCCAGCTC GTGTTCCAGG ACCCGATGGG CTCGCTCGAC
CCGCGCATGG CGGTCGCCGA CATCGTCGCC GAACCGCTGC TCAACCCCGC CAACCGCCGC
GAGCTCCCGG AGGCCGCCAC CCGCGCCGGG CGCGAGCGCC TGGTCCGCGA CGTGCTCGCC
GCCGTCGGGC TGCCCGACGA CGCCGCCGCG CGCTACCCGC ACCAGTTCAG CGGTGGGCAG
CGTCAGCGCA TCTCGATCGC GCGGGCTCTC GTGTGTCGCC CGAAGGTGCT GGTCGCGGAC
GAGCCGGTCA GCGCCCTCGA CGTCTCCGTG CGCGCCCAGG TTCTCGACCT GCTGGCCCGC
CTGGCTGACG AGCGCGACCT CACGCTCGTC CTCGTCTCGC ACGACCTCGC CGTGGTGCGG
CATCTGTGCG ACCGCGTCGC CGTCATGCGC GCGGGCGAGA TCGTCGAGCA GGGGCCCGCC
GACCGGATCT GGACGGAACC GCAGCACGAG TACACGCGCA CGCTCCAGGC GGCGACGCCG
GTGCTCACCA CGACGCCGAG GTAG
|
|---|
| Protein sequence | MTGPALAEPV GTPALRVDDL TVRTAGGRTL VSGVSLQVAA GERVGLIGES GSGKSLTALS
VLGLLPDNLV ATGRVDVAGE HDLLARSDRR LAPLRGSLVS MVFQEPMTAL NPLLRVGRQV
AEVITLHPST LHTSRRRGDA RARAVELLGE VGLPDPAAAA RAYPHQLSGG QRQRVMIAMA
LANDPALLVA DEPTTALDVT VQAQVLELMG RLVARRGTGL LFITHDLAVV SQVCERVVVM
KDGAVVEQGP VAEVFANPRH DYTRTLLAAS ILPPRPAVVE PRPPVVEPVE TTSTTGRPAI
RLRDVTKRFH RSGGVVVDAL RGISFEVAPG ERFGLVGESG SGKTTTLRLL AALDTPTSGT
VEVAGVTLAA LPPTSVPEDR PRGSGTRPTG TFGGRARARD VARVRSDLQL VFQDPMGSLD
PRMAVADIVA EPLLNPANRR ELPEAATRAG RERLVRDVLA AVGLPDDAAA RYPHQFSGGQ
RQRISIARAL VCRPKVLVAD EPVSALDVSV RAQVLDLLAR LADERDLTLV LVSHDLAVVR
HLCDRVAVMR AGEIVEQGPA DRIWTEPQHE YTRTLQAATP VLTTTPR
|
|---|
| |