| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_3100 |
|---|
| Symbol | |
|---|
| ID | 8650653 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | + |
|---|
| Start bp | 3434019 |
|---|
| End bp | 3436238 |
|---|
| Gene Length | 2220 bp |
|---|
| Protein Length | 739 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | isocitrate dehydrogenase, NADP-dependent |
|---|
| Protein accession | YP_003327659 |
|---|
| Protein GI | 269957870 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGGTC CGAGCACGAT CATCTACACC CACACCGACG AGGCACCGCT GCTGGCGACG
TACTCGTTCC TGCCGATCGT CCAGGCCTTC GCCGGCCAGG CGGGCGTCGC GCTCGAGACC
CGCGACATCT CGGTCGCGGC GCGCATCCTC GCGCTGTTCC CGGAGCGCCT CACGGAGGAG
CAGCGCGTCC CCGACGCCCT CGCCGAGCTC GGCCGCCTCG CCGACGCGCC CGAGGCCAAC
ATCATCAAGC TCCCCAACGT CTCCGCCTCG GTTCCGCAGC TCAAGGCGGC GATCGCCGAG
CTGCAGGCTC AGGGCTTCGA CGTGCCCGAC TACCCCGAGG CGCCCGCGAC GGACGAGGAG
CGCGAGATCC GCGCCCGCTA CGACCGCGTC AAGGGCTCCG CCGTGAACCC GGTGCTGCGC
CAGGGCAACT CCGACCGTCG CGCCCCCGCG TCGGTCAAGG CCTACGCCAA GGCGCACCCG
CACCGCATGG GCGCCTGGTC GCCGTCGTCG AAGACGAACG TGGCGACCAT GACCGAGGGT
GACTTCTTCC ACAACGAGAA GTCCGTGGTC ATCCCTGCCG ACGACACGCT GACCATCCGC
CTGGTCGCCG CCGACGGCTC GGTCTCGGTG CTCAAGGACG GGCTCAAGGT CCTCGCGGGC
GAGGTCGTGG ACGGCACGTT CATGTCCGCG CGCGCGCTGC GCGCCTTCCT CGCGGCGCAG
GTCGAGCGGG CGCAGGCCGA CGGCGTCCTG TTCTCCGCGC ACCTCAAGGC CACGATGATG
AAGGTCTCCG ACCCGATCAT CTTCGGGCAC GTGGTGCAGG CGTTCCTGCC CGCCGTGTTC
GAGCAGTTCG GGGACTCGCT GCGCGCCGCG GGCGTCTCCG CGAACGACGG CCTGGGCGCC
CTGCTCGCCG CGGCGTCGTC GCTGCCCGAC GGCGAGGCCA TCCGCCAGGC CGTGGCCGAG
GGTCTCGCCG CGGGCCCGGC GCTCGCGATG GTGAACTCCG ACAAGGGCAT CACCAACCTG
CACGTCCCCT CCGACGTCAT CATCGACGCC TCGATGCCCG CGATGATCCG CGGCGGCGGC
AAGATGTGGG GCCCCGACGG CGCGGAGCAC GACACGCTCG CCGTCATCCC CGACTCGTCC
TACGCGGGCG TCTACCAGGC CGCGATCGAC GACTGCCGCG CGCACGGCGC CCTCGACCCG
GCCGCCATCG GCACCGTCCC GAACGTCGGG CTCATGGCCC AGGCGGCCGA GGAGTACGGC
TCGCACGACA AGACGTTCGA GATCCCGGTG GACGGTGTGG TCGAGGTCGT CGCGTCGTCG
GGCGACGTGC TGTTCTCGCA CGACGTCGAG GCCGGCGACA TCTGGCGCGC CTGCCAGACC
AAGGACGCCC CGATCCGTGA CTGGGTCGCC CTGGCCGTGC GCCGCGCCCG CCTGTCGAAC
ACCCCGGCGG TGTTCTGGCT CGACGCGCAG CGCGCCCACG ACGCGAACCT CATCGAGAAG
CTCGAGCAGT ACCTGCCCGA GCACGACACC GAGGGTCTCG AGATCCACGT CATGGCCCCC
GCCGAGGCGA CGGCGTTCTC GTTCGCGCGC CTGCGCGCCG GCCTGGACAC CATCTCGGTG
ACCGGCAACG TGCTGCGCGA CTACAACACC GACCTGTTCC CCATCCTCGA GGTGGGCACC
TCGGCCAAGA TGCTCTCGGT CGTGCCGCTC ATGAACGGTG GCGGCCTGTT CGAGACGGGC
GCCGGCGGCT CCGCGCCGAA GCACGTGCAG CAGCTCGTCG AGGAGAACTA CCTGCGCTGG
GACTCCCTCG GTGAGTTCTT CGCCCTCGCG GCGTCGTTCG AGCACCTCGC GCAGACGACG
GACAACGCCC GCGCACAGCT CCTCGCCGAC ACCCTCGACC GCGCGACCGG CACGTTCCTC
GACGAGGACC GCTCCCCCGG CCGCAAGCTC GGCACCATCG ACAACCGCGG CTCGCACTTC
TACCTGGCGC TGTACTGGGC CCAGGAGCTC GCCGCGCAGA CCACGGACCC GGAGCTCGCG
GCGGCCTTCG CGCCGCTCGC CGCCGCGCTC GCGGAGAACG AGCAGACGAT CGTCGACGAG
CTGATCGCCG TCCAGGGCAA GCCCGCCGAC ATCGGCGGCT ACTACCGCCC GGACGCGACC
CTGACGAGCG CGGTCATGCG CCCGAGCGCC ACGTTCAACA AGGCCCTCGC CGCCCTCTGA
|
|---|
| Protein sequence | MAGPSTIIYT HTDEAPLLAT YSFLPIVQAF AGQAGVALET RDISVAARIL ALFPERLTEE
QRVPDALAEL GRLADAPEAN IIKLPNVSAS VPQLKAAIAE LQAQGFDVPD YPEAPATDEE
REIRARYDRV KGSAVNPVLR QGNSDRRAPA SVKAYAKAHP HRMGAWSPSS KTNVATMTEG
DFFHNEKSVV IPADDTLTIR LVAADGSVSV LKDGLKVLAG EVVDGTFMSA RALRAFLAAQ
VERAQADGVL FSAHLKATMM KVSDPIIFGH VVQAFLPAVF EQFGDSLRAA GVSANDGLGA
LLAAASSLPD GEAIRQAVAE GLAAGPALAM VNSDKGITNL HVPSDVIIDA SMPAMIRGGG
KMWGPDGAEH DTLAVIPDSS YAGVYQAAID DCRAHGALDP AAIGTVPNVG LMAQAAEEYG
SHDKTFEIPV DGVVEVVASS GDVLFSHDVE AGDIWRACQT KDAPIRDWVA LAVRRARLSN
TPAVFWLDAQ RAHDANLIEK LEQYLPEHDT EGLEIHVMAP AEATAFSFAR LRAGLDTISV
TGNVLRDYNT DLFPILEVGT SAKMLSVVPL MNGGGLFETG AGGSAPKHVQ QLVEENYLRW
DSLGEFFALA ASFEHLAQTT DNARAQLLAD TLDRATGTFL DEDRSPGRKL GTIDNRGSHF
YLALYWAQEL AAQTTDPELA AAFAPLAAAL AENEQTIVDE LIAVQGKPAD IGGYYRPDAT
LTSAVMRPSA TFNKALAAL
|
|---|
| |