Gene Xcel_3055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXcel_3055 
Symbol 
ID8650604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylanimonas cellulosilytica DSM 15894 
KingdomBacteria 
Replicon accessionNC_013530 
Strand
Start bp3383886 
End bp3384908 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content72% 
IMG OID 
Productperiplasmic binding protein 
Protein accessionYP_003327615 
Protein GI269957826 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCTGC GCAGAACCGC GCCCCTGGCG AGCTCCGCCG CCCTCCTGCT CGCCCTGAGC 
CTGTCGGCCT GCGGCACGAC CGACCCGGGT GCGGCCGCAG CCGCCCCGGC CGGGACCGCC
GACGGCGAGT GCGCCGACGT CGCCACCTCC ACCGGTCCCG TCTCGCTGAC GGACTCGTTC
GGCCGCACGG TCGAGCTCGA CAAGCCCGCC GAGCGGGTCG CCGTGCTCGA ATGGCAGCAG
ATCGAGGACA CGCTCACGCT GTGCGTCACA CCGGTCGCGG TCGCCGACGT CGCCGGATAC
ACGACGTGGA ACGACGCCGA GAAGCTCCCC GAGGGCGTGA CCGACGTCGG GACGCGCGGT
GAGCCCAACC TCGACACCCT CTACGCGGCC GACCCCGACC TGGTGATCGT CGAGGCGTAC
ACGCCCGACG ACGAGATCAT CGCGACGCTC GAGGCGTACG GCGTCCCGGT CCTGGCCACC
AAGGGTGCCG ACGCCGCCGA CCCGATCGCG AACATGTTCG CCACGTTCGA CCTCATCGCC
CAGGCGACCG GCCGCACCGA CCGGGCCGAG GCGGTCGCCG AGGAGTTCGA GGCGCACCTC
GCCGACGCGA CGCAGCGGAT CGCGGACGCC GCGCCCGAGC ACACCGACTT CGTCTACTTC
GACGGCTGGG TCGACGGCGG CAACGTCGCC CTGCGCCCGT TCGGCCAGGG GTCGCTCGTC
GGCGAGCTCG GCGAGGCGCT CGGCCTGAAC AACGCGTGGA CGGGCGAGGT CGACCCGGCC
TACGGCCTGG GCCAGTCGGA CATCGAGGGC ATGTCCGCCG TCGGTGACGC GACCTTCCTG
TACACCGGCA CCCAGGACGG CGACGACTGG ACCGCGTCGC TGGCGAAGAA CGCCGTGTGG
GCGAACCTGC CGTCCGTGGT CGACGGTCGC ACCCACGCGT TCCCCGAGCA CATCTGGACG
TTCGGCGGAC CCCGCTCGGC CGAGAAGATC GTCGACGCGT ACGTCGACGT CTTCGCGCGC
TGA
 
Protein sequence
MSLRRTAPLA SSAALLLALS LSACGTTDPG AAAAAPAGTA DGECADVATS TGPVSLTDSF 
GRTVELDKPA ERVAVLEWQQ IEDTLTLCVT PVAVADVAGY TTWNDAEKLP EGVTDVGTRG
EPNLDTLYAA DPDLVIVEAY TPDDEIIATL EAYGVPVLAT KGADAADPIA NMFATFDLIA
QATGRTDRAE AVAEEFEAHL ADATQRIADA APEHTDFVYF DGWVDGGNVA LRPFGQGSLV
GELGEALGLN NAWTGEVDPA YGLGQSDIEG MSAVGDATFL YTGTQDGDDW TASLAKNAVW
ANLPSVVDGR THAFPEHIWT FGGPRSAEKI VDAYVDVFAR